Detailed information NTG0129942

Bioinformatically predicted

Overview

• Name: pilY2
• Type: Machinery gene
• Locus tag: LX00_RS16705
• Genome accession: NZ_CP009534
• Coordinates: 3519690..3520172 (-)
• Length: 160 a.a.
• NCBI ID: WP_001046417.1
• Uniprot ID: -
• Organism: Acinetobacter baumannii strain Strain AbH12O-A2
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 3514690..3525172

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
LX00_RS16670 (LX00_16960)	-	3514797..3515831 (+)	1035	WP_001189451.1	lipase secretion chaperone	-
LX00_RS16675 (LX00_16965)	-	3515946..3516887 (+)	942	WP_085943440.1	triacylglycerol lipase	-
LX00_RS16680 (LX00_16970)	rplS	3516940..3517308 (-)	369	WP_000014562.1	50S ribosomal protein L19	-
LX00_RS16685 (LX00_16975)	trmD	3517516..3518256 (-)	741	WP_000464596.1	tRNA (guanosine(37)-N1)-methyltransferase TrmD	-
LX00_RS16690 (LX00_16980)	rimM	3518302..3518850 (-)	549	WP_000189236.1	ribosome maturation factor RimM	-
LX00_RS16695 (LX00_16985)	rpsP	3518870..3519121 (-)	252	WP_000260334.1	30S ribosomal protein S16	-
LX00_RS16700 (LX00_16990)	pilE	3519268..3519693 (-)	426	WP_000788342.1	type IV pilin protein	Machinery gene
LX00_RS16705 (LX00_16995)	pilY2	3519690..3520172 (-)	483	WP_001046417.1	type IV pilin protein	Machinery gene
LX00_RS16710 (LX00_17000)	pilY1	3520185..3524039 (-)	3855	WP_000768966.1	PilC/PilY family type IV pilus protein	Machinery gene
LX00_RS16715 (LX00_17005)	pilX	3524051..3524869 (-)	819	WP_000149374.1	PilX N-terminal domain-containing pilus assembly protein	Machinery gene

Sequence

Protein

• Length: 160 a.a.
• Molecular weight: 17516.77 Da
• Isoelectric Point: 8.4817

>NTDB_id=129942 LX00_RS16705 WP_001046417.1 3519690..3520172(-) (pilY2) [Acinetobacter baumannii strain Strain AbH12O-A2]
MNKYSILRFNQGVTLIELMVVIVIVAIFASIAIPSYQSYSRRATASAAKSEILKLAEQLEQHKSRNFTYRGFTTTSITLP
RGGYTIQITDDTTTGNLLTNAAANGQTWVIKATTTDSRNFNFIAKNSGLRCQSLTATAVDNDCGGTVTCNVCETNSENWQ

Nucleotide

• Length: 483 bp

>NTDB_id=129942 LX00_RS16705 WP_001046417.1 3519690..3520172(-) (pilY2) [Acinetobacter baumannii strain Strain AbH12O-A2]
ATGAATAAGTACTCTATTCTACGGTTCAATCAAGGGGTTACCTTGATTGAGCTTATGGTCGTGATTGTTATCGTTGCTAT
TTTTGCTTCAATTGCTATCCCTTCATATCAAAGTTATAGCCGTAGAGCTACTGCATCTGCGGCTAAAAGTGAAATTTTGA
AATTAGCTGAACAATTGGAACAGCATAAATCAAGAAATTTTACTTATAGGGGGTTTACCACAACCTCTATAACCCTACCT
CGCGGGGGATATACGATTCAGATTACTGATGATACGACGACAGGAAATTTATTGACGAATGCTGCTGCAAATGGACAAAC
ATGGGTCATTAAAGCGACAACTACAGATTCAAGAAACTTTAATTTTATTGCTAAGAATTCAGGTTTGCGTTGTCAAAGTT
TAACAGCTACGGCTGTTGATAATGACTGTGGTGGAACAGTCACTTGCAATGTATGTGAAACAAATAGTGAGAATTGGCAA
TGA

Domains

Predicted by InterproScan.

• Type IV minor pilin ComP, DNA uptake sequence receptor (ComP_DUS) (34-115)

• Prokaryotic N-terminal methylation motif (N_methyl) (10-32)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilY2	Acinetobacter baumannii D1279779	98.125	100	0.981
comE	Acinetobacter baylyi ADP1	41.279	100	0.444