Detailed information    

insolico Bioinformatically predicted

Overview


Name   letA   Type   Regulator
Locus tag   ACJ74_RS04455 Genome accession   NZ_CP011915
Coordinates   889158..889748 (+) Length   196 a.a.
NCBI ID   WP_000633668.1    Uniprot ID   P0AGA7
Organism   Escherichia coli strain PSUO2     
Function   regulate competence development (predicted from homology)   
Competence regulation

Genomic Context


Location: 884158..894748
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACJ74_RS26400 ysdE 885187..885261 (+) 75 WP_211180519.1 protein YsdE -
  ACJ74_RS04425 (ACJ74_04300) ivbL 885506..885604 (+) 99 WP_001312198.1 ilvB operon leader peptide IvbL -
  ACJ74_RS04430 (ACJ74_04305) ilvB 885710..887398 (+) 1689 WP_000168476.1 acetolactate synthase large subunit -
  ACJ74_RS04435 (ACJ74_04310) ilvN 887402..887692 (+) 291 WP_001181706.1 acetolactate synthase small subunit -
  ACJ74_RS04440 (ACJ74_04315) - 887883..888743 (-) 861 WP_001259006.1 DUF6708 domain-containing protein -
  ACJ74_RS04455 (ACJ74_04325) letA 889158..889748 (+) 591 WP_000633668.1 transcriptional regulator UhpA Regulator
  ACJ74_RS04460 (ACJ74_04330) uhpB 889748..891250 (+) 1503 WP_001314238.1 signal transduction histidine-protein kinase/phosphatase UhpB -
  ACJ74_RS04465 (ACJ74_04335) uhpC 891260..892579 (+) 1320 WP_001298006.1 MFS transporter family glucose-6-phosphate receptor UhpC -
  ACJ74_RS04470 (ACJ74_04340) uhpT 892717..894108 (+) 1392 WP_000879194.1 hexose-6-phosphate:phosphate antiporter -

Sequence


Protein


Download         Length: 196 a.a.        Molecular weight: 20889.30 Da        Isoelectric Point: 5.9982

>NTDB_id=129797 ACJ74_RS04455 WP_000633668.1 889158..889748(+) (letA) [Escherichia coli strain PSUO2]
MITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDISGLELLSQLPKGMATIMLSV
HDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVATGGCYLTPDIAIKLASGRQDPLTKRERQVAEKLAQGMAVKEIAA
ELGLSPKTVHVHRANLMEKLGVSNDVELARRMFDGW

Nucleotide


Download         Length: 591 bp        

>NTDB_id=129797 ACJ74_RS04455 WP_000633668.1 889158..889748(+) (letA) [Escherichia coli strain PSUO2]
ATGATCACCGTTGCCCTTATAGACGATCACCTTATCGTCCGCTCCGGCTTTGCGCAGCTGCTGGGGCTGGAACCTGATTT
GCAGGTAGTTGCCGAGTTTGGTTCGGGGCGCGAGGCGCTGGCGGGGCTGCCGGGGCGCGGTGTGCAGGTGTGTATTTGCG
ATATCTCCATGCCTGATATCTCCGGTCTGGAGCTTCTAAGCCAGCTGCCGAAAGGCATGGCGACAATTATGCTCTCCGTT
CATGACAGTCCGGCGCTGGTTGAGCAGGCGCTTAACGCGGGGGCGCGCGGCTTTCTCTCCAAACGCTGTAGCCCGGATGA
ACTCATTGCTGCGGTGCATACGGTTGCCACGGGCGGCTGTTATCTGACGCCGGATATTGCCATTAAACTGGCATCCGGTC
GCCAGGACCCGCTAACCAAACGCGAACGCCAGGTGGCGGAAAAACTGGCGCAAGGAATGGCGGTGAAAGAGATTGCTGCC
GAACTGGGCTTGTCACCGAAAACGGTACATGTCCATCGCGCCAACCTGATGGAAAAACTGGGCGTCAGTAACGACGTTGA
ACTGGCGCGCCGCATGTTTGATGGCTGGTGA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB P0AGA7

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  letA Legionella pneumophila str. Paris

38.5

100

0.393

  letA Legionella pneumophila strain ERS1305867

38.5

100

0.393

  degU Bacillus subtilis subsp. subtilis str. 168

33.184

100

0.378


Multiple sequence alignment