Detailed information NTG0129680

Bioinformatically predicted

Overview

• Name: ccpA
• Type: Regulator
• Locus tag: ABU16_RS20060
• Genome accession: NZ_CP011882
• Coordinates: 3857579..3858583 (-)
• Length: 334 a.a.
• NCBI ID: WP_003229285.1
• Uniprot ID: P25144
• Organism: Bacillus subtilis strain TO-A JPC
• Function: regulate comCDE transcription and transformation (predicted from homology) Competence regulation

Genomic Context

Location: 3852579..3863583

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ABU16_RS20035 (ABU16_3998)	acuA	3853506..3854138 (+)	633	WP_003229296.1	acetoin utilization protein acetyltransferase AcuA	-
ABU16_RS20040 (ABU16_3999)	acuB	3854165..3854809 (+)	645	WP_003229294.1	acetoin utilization AcuB family protein	-
ABU16_RS20045 (ABU16_4000)	acuC	3854806..3855969 (+)	1164	WP_004398517.1	acetoin utilization protein AcuC	-
ABU16_RS20050 (ABU16_4001)	motS	3855980..3856708 (-)	729	WP_003229290.1	flagellar motor protein MotS	-
ABU16_RS20055 (ABU16_4002)	motP	3856698..3857516 (-)	819	WP_004398692.1	flagellar motor protein MotP	-
ABU16_RS20060 (ABU16_4003)	ccpA	3857579..3858583 (-)	1005	WP_003229285.1	catabolite control protein A	Regulator
ABU16_RS20065 (ABU16_4004)	aroX	3858859..3859935 (-)	1077	WP_003223454.1	bifunctional 3-deoxy-7-phosphoheptulonate synthase/chorismate mutase	-
ABU16_RS20070 (ABU16_4005)	ytxJ	3860171..3860497 (-)	327	WP_003229280.1	bacillithiol system redox-active protein YtxJ	-
ABU16_RS20075 (ABU16_4006)	ytxH	3860521..3860976 (-)	456	WP_004398549.1	YtxH domain-containing protein	-
ABU16_RS20080 (ABU16_4007)	ytxG	3861007..3861429 (-)	423	WP_003229276.1	DUF948 domain-containing protein	-
ABU16_RS20085 (ABU16_4008)	murC	3861591..3862889 (-)	1299	WP_003229274.1	UDP-N-acetylmuramate--L-alanine ligase	-

Sequence

Protein

• Length: 334 a.a.
• Molecular weight: 36940.34 Da
• Isoelectric Point: 5.0249

>NTDB_id=129680 ABU16_RS20060 WP_003229285.1 3857579..3858583(-) (ccpA) [Bacillus subtilis strain TO-A JPC]
MSNITIYDVAREANVSMATVSRVVNGNPNVKPTTRKKVLEAIERLGYRPNAVARGLASKKTTTVGVIIPDISSIFYSELA
RGIEDIATMYKYNIILSNSDQNMEKELHLLNTMLGKQVDGIVFMGGNITDEHVAEFKRSPVPIVLAASVEEQEETPSVAI
DYEQAIYDAVKLLVDKGHTDIAFVSGPMAEPINRSKKLQGYKRALEEANLPFNEQFVAEGDYTYDSGLEALQHLMSLDKK
PTAILSATDEMALGIIHAAQDQGLSIPEDLDIIGFDNTRLSLMVRPQLSTVVQPTYDIGAVAMRLLTKLMNKEPVEEHIV
ELPHRIELRKSTKS

Nucleotide

• Length: 1005 bp

>NTDB_id=129680 ABU16_RS20060 WP_003229285.1 3857579..3858583(-) (ccpA) [Bacillus subtilis strain TO-A JPC]
ATGAGCAATATTACGATCTACGATGTAGCGAGAGAAGCTAATGTAAGCATGGCAACCGTTTCCCGTGTCGTGAACGGCAA
CCCGAATGTAAAACCGACAACGAGGAAAAAAGTCTTGGAAGCCATTGAACGTCTCGGTTACCGTCCAAACGCGGTGGCAA
GAGGGCTGGCAAGTAAAAAAACAACAACTGTAGGTGTCATCATTCCCGATATCTCAAGCATTTTCTATTCAGAGCTTGCG
CGCGGAATTGAAGATATCGCGACAATGTATAAATACAATATTATTTTGAGCAACTCTGACCAAAACATGGAGAAAGAGCT
GCACTTGTTAAACACAATGCTCGGCAAACAAGTGGACGGCATCGTGTTTATGGGCGGAAACATTACGGACGAGCATGTGG
CGGAATTTAAGCGTTCTCCAGTGCCGATTGTACTTGCCGCTTCTGTAGAAGAGCAGGAGGAAACACCGTCAGTCGCTATC
GATTACGAACAGGCGATTTATGATGCCGTGAAGCTTTTGGTTGATAAAGGACATACAGACATCGCGTTCGTTTCCGGACC
AATGGCAGAACCGATCAACCGTTCGAAAAAACTCCAAGGCTACAAACGTGCGCTTGAAGAAGCGAACCTTCCGTTTAATG
AACAATTTGTAGCTGAAGGGGATTACACATATGATTCCGGACTCGAAGCACTGCAGCATCTGATGAGCCTGGATAAAAAA
CCGACAGCCATTCTTTCTGCAACTGATGAAATGGCACTCGGCATTATCCATGCCGCTCAGGATCAGGGCTTATCCATTCC
GGAGGATCTCGACATTATCGGTTTTGATAATACAAGATTAAGCCTCATGGTTCGTCCTCAGCTTTCAACAGTTGTTCAGC
CGACATATGATATCGGCGCCGTTGCGATGAGACTGCTGACGAAGCTCATGAATAAAGAGCCGGTTGAAGAGCATATCGTC
GAACTGCCGCACCGTATAGAGCTTAGAAAGTCAACCAAGTCATAA

Domains

Predicted by InterProScan.

• Bacterial regulatory proteins, lacI family (LacI) (5-50)

• Periplasmic binding protein-like domain (Peripla_BP_3) (171-332)

3D structure

• PDB: 1ZVV
• PDB: 2FEP
• PDB: 3OQM
• PDB: 3OQN
• PDB: 3OQO

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
ccpA	Streptococcus pneumoniae D39	54.545	98.802	0.539
ccpA	Streptococcus gordonii str. Challis substr. CH1	53.636	98.802	0.53
ccpA	Lactococcus lactis subsp. lactis strain DGCC12653	50.602	99.401	0.503