Detailed information    

insolico Bioinformatically predicted

Overview


Name   eeP   Type   Regulator
Locus tag   LG36_RS10830 Genome accession   NZ_CP009472
Coordinates   2239215..2240501 (-) Length   428 a.a.
NCBI ID   WP_038602371.1    Uniprot ID   -
Organism   Lactococcus lactis strain AI06     
Function   processing of ComS (predicted from homology)   
Competence regulation

Genomic Context


Location: 2234215..2245501
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  LG36_RS10815 (LG36_2066) - 2235406..2235942 (-) 537 WP_038602368.1 hypothetical protein -
  LG36_RS10820 (LG36_2067) - 2235948..2237279 (-) 1332 WP_021721864.1 FAD/NAD(P)-binding oxidoreductase -
  LG36_RS10825 (LG36_2068) - 2237295..2239145 (-) 1851 WP_029344534.1 proline--tRNA ligase -
  LG36_RS10830 (LG36_2069) eeP 2239215..2240501 (-) 1287 WP_038602371.1 RIP metalloprotease RseP Regulator
  LG36_RS10835 (LG36_2070) - 2240520..2241323 (-) 804 WP_038602374.1 phosphatidate cytidylyltransferase -
  LG36_RS10840 (LG36_2071) - 2241323..2242057 (-) 735 WP_003130589.1 isoprenyl transferase -
  LG36_RS10845 (LG36_2072) yajC 2242429..2242761 (-) 333 WP_021721860.1 preprotein translocase subunit YajC -
  LG36_RS10850 (LG36_2073) - 2242856..2243554 (-) 699 WP_038602377.1 DNA alkylation repair protein -
  LG36_RS10855 (LG36_2074) rlmH 2243573..2244052 (-) 480 WP_038602380.1 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH -

Sequence


Protein


Download         Length: 428 a.a.        Molecular weight: 46441.99 Da        Isoelectric Point: 6.5147

>NTDB_id=129666 LG36_RS10830 WP_038602371.1 2239215..2240501(-) (eeP) [Lactococcus lactis strain AI06]
MIETLITFIIIFGIIVAIHEYGHLWWAKRSGILVREYAVGMGPKIFAHQAKDGTLYTIRILPLGGYVRLAGWGDDKTEIK
KGQAASLVVSKSEVINPEAENSVSNIVRRINLSEHVELEEAIPMLITEYDFEKELFIEGEVFGEIKRYSVDHDATIIEED
GTEVRIAPLDVQYQSASVFHKMLTNFGGPLNNFILGIIAFIVLTFVQGGVPSTTNAIGQVEKGTPAYNAGLKAGDKIEAV
NGTKTADWNNVVTEISGSKGKELKLEVSRSGKSETLSVTPKKMDGSYRVGIMQSMKTGFFDKITGGFVQAGQSATAIFKA
LGSLIARPSLDKLGGPVAIYQLSGQAARAGLPTIINLLAMLSINLGIVNLFPIPVLDGGKIVLNIIEAIRGKALSQEKES
IITMVGVVFMLVLFVAVTWNDILRAFIN

Nucleotide


Download         Length: 1287 bp        

>NTDB_id=129666 LG36_RS10830 WP_038602371.1 2239215..2240501(-) (eeP) [Lactococcus lactis strain AI06]
TTGATAGAAACACTGATTACTTTTATTATTATCTTTGGTATTATTGTCGCTATCCATGAATATGGCCATCTTTGGTGGGC
AAAACGTTCAGGAATTTTAGTGCGTGAATATGCCGTTGGAATGGGCCCGAAAATTTTTGCTCACCAAGCAAAAGATGGGA
CACTTTACACGATAAGAATTCTTCCGCTCGGTGGCTATGTTCGTTTGGCTGGTTGGGGTGATGACAAGACTGAAATCAAA
AAAGGACAAGCTGCAAGTCTTGTTGTCAGTAAATCTGAAGTAATAAATCCAGAAGCTGAAAATTCTGTTAGTAATATCGT
CAGAAGAATTAATCTGTCAGAACATGTTGAATTAGAAGAAGCAATTCCAATGTTGATTACTGAATATGATTTTGAAAAAG
AACTTTTCATTGAAGGAGAAGTTTTTGGGGAAATCAAACGTTATTCTGTTGATCATGATGCAACAATCATTGAAGAAGAT
GGAACGGAAGTTCGGATTGCACCACTCGATGTTCAATATCAATCAGCCAGTGTCTTTCATAAAATGTTGACAAACTTCGG
TGGTCCTTTGAATAACTTTATTTTAGGAATCATTGCTTTTATCGTTCTAACCTTTGTTCAAGGAGGCGTTCCTTCAACTA
CTAATGCTATTGGCCAAGTTGAAAAAGGAACACCCGCTTACAATGCAGGCTTAAAAGCTGGTGATAAAATTGAAGCAGTC
AATGGAACTAAAACGGCAGATTGGAACAATGTTGTTACTGAAATTTCAGGCTCTAAAGGAAAAGAATTAAAACTTGAAGT
TAGTCGTTCAGGCAAATCGGAAACCTTATCAGTTACACCTAAAAAAATGGACGGAAGTTACCGTGTTGGCATTATGCAAT
CAATGAAAACAGGTTTCTTTGATAAGATTACAGGTGGCTTTGTTCAAGCAGGCCAATCAGCGACTGCAATCTTTAAAGCT
TTAGGAAGTTTGATTGCACGACCGAGTCTTGACAAACTTGGTGGCCCAGTTGCTATTTATCAACTCAGTGGCCAAGCCGC
GAGAGCAGGTTTGCCGACGATTATTAATCTTTTAGCTATGCTTTCAATTAATTTAGGGATTGTCAATCTTTTCCCTATTC
CAGTACTTGATGGTGGAAAAATTGTCCTAAATATTATTGAAGCAATTCGTGGCAAAGCACTCTCACAAGAAAAGGAATCA
ATCATCACAATGGTAGGAGTTGTCTTCATGCTTGTGCTCTTTGTAGCAGTAACATGGAATGATATTCTCCGAGCCTTTAT
CAATTAA

Domains


Predicted by InterproScan.

(7-413)

(218-269)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  eeP Streptococcus thermophilus LMG 18311

57.077

100

0.575

  eeP Streptococcus thermophilus LMD-9

56.845

100

0.572


Multiple sequence alignment