Detailed information
Bioinformatically predicted
Overview
| Name | pilN | Type | Machinery gene |
| Locus tag | IX91_RS13895 | Genome accession | NZ_CP009354 |
| Coordinates | 3032520..3033083 (-) | Length | 187 a.a. |
| NCBI ID | WP_004743297.1 | Uniprot ID | F9T1K2 |
| Organism | Vibrio tubiashii ATCC 19109 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 3027520..3038083
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| IX91_RS13870 (IX91_14155) | aroB | 3027933..3029021 (-) | 1089 | WP_004743302.1 | 3-dehydroquinate synthase | - |
| IX91_RS13875 (IX91_14160) | aroK | 3029050..3029568 (-) | 519 | WP_004743301.1 | shikimate kinase AroK | - |
| IX91_RS13880 (IX91_14165) | pilQ | 3029745..3031439 (-) | 1695 | WP_050809758.1 | type IV pilus secretin PilQ | Machinery gene |
| IX91_RS13885 (IX91_14170) | pilP | 3031453..3031956 (-) | 504 | WP_004743299.1 | pilus assembly protein PilP | Machinery gene |
| IX91_RS13890 (IX91_14175) | pilO | 3031946..3032533 (-) | 588 | WP_004743298.1 | type 4a pilus biogenesis protein PilO | Machinery gene |
| IX91_RS13895 (IX91_14180) | pilN | 3032520..3033083 (-) | 564 | WP_004743297.1 | PilN domain-containing protein | Machinery gene |
| IX91_RS13900 (IX91_14185) | pilM | 3033073..3034068 (-) | 996 | WP_004743296.1 | type IV pilus assembly protein PilM | Machinery gene |
| IX91_RS13905 (IX91_14190) | - | 3034209..3036728 (+) | 2520 | WP_004743295.1 | penicillin-binding protein 1A | - |
| IX91_RS13910 (IX91_14195) | oxyR | 3036797..3037687 (-) | 891 | WP_004743294.1 | DNA-binding transcriptional regulator OxyR | - |
Sequence
Protein
Download Length: 187 a.a. Molecular weight: 21603.83 Da Isoelectric Point: 7.0753
>NTDB_id=128873 IX91_RS13895 WP_004743297.1 3032520..3033083(-) (pilN) [Vibrio tubiashii ATCC 19109]
MLHSINLLPWREELRDYRQKRFRLLMMVTLIIAVIIQWGIGSYIEQQQDRQSERNDYLVRHGEQLDQQLNQLKVVEREHQ
ALLTRLSVIEGLQKERNKTTDFMNLLPELIPAGVYIDKLKINGLQVELVGISDSTSHLATMLDNLEKSPAVTNVEMHSIV
HGTTRFASKYQSYRVSFSLLGGQSESL
MLHSINLLPWREELRDYRQKRFRLLMMVTLIIAVIIQWGIGSYIEQQQDRQSERNDYLVRHGEQLDQQLNQLKVVEREHQ
ALLTRLSVIEGLQKERNKTTDFMNLLPELIPAGVYIDKLKINGLQVELVGISDSTSHLATMLDNLEKSPAVTNVEMHSIV
HGTTRFASKYQSYRVSFSLLGGQSESL
Nucleotide
Download Length: 564 bp
>NTDB_id=128873 IX91_RS13895 WP_004743297.1 3032520..3033083(-) (pilN) [Vibrio tubiashii ATCC 19109]
ATGCTGCATAGCATCAATCTATTGCCGTGGCGTGAAGAGCTGCGAGATTATCGCCAAAAGCGCTTTAGACTGCTGATGAT
GGTTACGCTAATCATTGCTGTGATTATCCAGTGGGGCATCGGCAGTTATATAGAGCAGCAACAGGATCGGCAATCTGAGC
GTAATGACTACCTTGTACGTCATGGAGAGCAATTGGACCAACAGCTTAACCAACTGAAAGTCGTCGAACGCGAACATCAA
GCTCTACTTACCCGTTTGTCGGTTATTGAGGGGTTGCAGAAAGAGCGCAATAAAACTACAGACTTTATGAATTTATTGCC
TGAGCTGATTCCAGCTGGTGTTTACATCGACAAGCTAAAGATCAATGGCCTGCAGGTTGAGCTTGTTGGGATCAGCGATT
CAACTTCTCATCTTGCCACCATGCTAGACAACCTCGAAAAATCACCCGCAGTAACTAACGTCGAGATGCATTCCATTGTT
CATGGTACGACTCGATTTGCCAGTAAGTACCAATCATATCGTGTCTCTTTTTCTCTTTTAGGAGGTCAGAGTGAATCGCT
TTAA
ATGCTGCATAGCATCAATCTATTGCCGTGGCGTGAAGAGCTGCGAGATTATCGCCAAAAGCGCTTTAGACTGCTGATGAT
GGTTACGCTAATCATTGCTGTGATTATCCAGTGGGGCATCGGCAGTTATATAGAGCAGCAACAGGATCGGCAATCTGAGC
GTAATGACTACCTTGTACGTCATGGAGAGCAATTGGACCAACAGCTTAACCAACTGAAAGTCGTCGAACGCGAACATCAA
GCTCTACTTACCCGTTTGTCGGTTATTGAGGGGTTGCAGAAAGAGCGCAATAAAACTACAGACTTTATGAATTTATTGCC
TGAGCTGATTCCAGCTGGTGTTTACATCGACAAGCTAAAGATCAATGGCCTGCAGGTTGAGCTTGTTGGGATCAGCGATT
CAACTTCTCATCTTGCCACCATGCTAGACAACCTCGAAAAATCACCCGCAGTAACTAACGTCGAGATGCATTCCATTGTT
CATGGTACGACTCGATTTGCCAGTAAGTACCAATCATATCGTGTCTCTTTTTCTCTTTTAGGAGGTCAGAGTGAATCGCT
TTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilN | Vibrio cholerae strain A1552 |
55 |
96.257 |
0.529 |
| pilN | Vibrio campbellii strain DS40M4 |
51.064 |
100 |
0.513 |