Detailed information
Bioinformatically predicted
Overview
| Name | crp | Type | Regulator |
| Locus tag | JV59_RS13930 | Genome accession | NZ_CP009264 |
| Coordinates | 2970022..2970654 (+) | Length | 210 a.a. |
| NCBI ID | WP_004410522.1 | Uniprot ID | A0A240EMA6 |
| Organism | Vibrio coralliilyticus strain OCN014 | ||
| Function | promote expression of competence genes (predicted from homology) Competence regulation |
||
Genomic Context
Location: 2965022..2975654
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| JV59_RS13905 (JV59_37970) | - | 2965186..2967108 (+) | 1923 | WP_038513777.1 | ABC transporter ATP-binding protein | - |
| JV59_RS13910 (JV59_37975) | - | 2967105..2967581 (+) | 477 | WP_038513779.1 | TIGR02444 family protein | - |
| JV59_RS13915 (JV59_37980) | - | 2967593..2968570 (+) | 978 | WP_038513782.1 | hydrolase | - |
| JV59_RS13920 (JV59_37985) | - | 2968610..2968822 (+) | 213 | WP_038513784.1 | YheU family protein | - |
| JV59_RS13925 (JV59_37990) | - | 2968910..2969779 (+) | 870 | WP_019276788.1 | phosphoribulokinase | - |
| JV59_RS13930 (JV59_37995) | crp | 2970022..2970654 (+) | 633 | WP_004410522.1 | cAMP-activated global transcriptional regulator CRP | Regulator |
| JV59_RS13935 (JV59_38000) | - | 2970783..2971574 (-) | 792 | WP_038513788.1 | DUF1338 domain-containing protein | - |
| JV59_RS13940 (JV59_38005) | astD | 2971752..2973209 (-) | 1458 | WP_038513790.1 | succinylglutamate-semialdehyde dehydrogenase | - |
| JV59_RS13945 (JV59_38010) | astA | 2973227..2974246 (-) | 1020 | WP_006963238.1 | arginine N-succinyltransferase | - |
Sequence
Protein
Download Length: 210 a.a. Molecular weight: 23596.37 Da Isoelectric Point: 7.4009
>NTDB_id=127866 JV59_RS13930 WP_004410522.1 2970022..2970654(+) (crp) [Vibrio coralliilyticus strain OCN014]
MVLGKPQTDPTLEWFLSHCHIHKYPSKSTLIHAGEKAETLYYIVKGSVAVLIKDEEGKEMILSYLNQGDFIGELGLFEED
QERTAWVRAKSPCEVAEISFKKFRQLIQVNPDILMRLSAQMASRLQVTSQKVGDLAFLDVTGRIAQTLLNLAKQPDAMTH
PDGMQIKITRQEIGQIVGCSRETVGRILKMLEEQNLISAHGKTIVVYGTR
MVLGKPQTDPTLEWFLSHCHIHKYPSKSTLIHAGEKAETLYYIVKGSVAVLIKDEEGKEMILSYLNQGDFIGELGLFEED
QERTAWVRAKSPCEVAEISFKKFRQLIQVNPDILMRLSAQMASRLQVTSQKVGDLAFLDVTGRIAQTLLNLAKQPDAMTH
PDGMQIKITRQEIGQIVGCSRETVGRILKMLEEQNLISAHGKTIVVYGTR
Nucleotide
Download Length: 633 bp
>NTDB_id=127866 JV59_RS13930 WP_004410522.1 2970022..2970654(+) (crp) [Vibrio coralliilyticus strain OCN014]
ATGGTTCTAGGTAAACCTCAAACCGATCCAACATTAGAGTGGTTCCTTTCACACTGTCATATTCATAAGTACCCGTCAAA
AAGCACGCTGATCCACGCGGGCGAAAAAGCAGAGACTCTTTACTACATTGTTAAAGGTTCTGTTGCAGTACTTATCAAAG
ACGAAGAAGGTAAGGAAATGATCCTTTCTTACCTAAACCAAGGTGACTTTATCGGTGAACTTGGTTTATTCGAAGAAGAC
CAAGAGCGTACGGCATGGGTTCGTGCGAAATCTCCTTGTGAAGTAGCAGAAATTTCATTCAAGAAATTCCGTCAGCTAAT
CCAAGTTAACCCTGACATCCTAATGCGCCTGTCTGCACAAATGGCAAGCCGTCTACAGGTAACCAGTCAGAAAGTGGGTG
ACTTGGCATTCCTAGACGTAACAGGCCGCATCGCGCAAACACTGCTTAACCTGGCAAAACAGCCAGATGCAATGACACAC
CCAGACGGCATGCAGATCAAGATCACTCGTCAGGAAATCGGTCAGATTGTTGGCTGTTCTCGTGAAACAGTAGGTCGTAT
CTTGAAGATGCTAGAAGAGCAGAACCTAATTTCTGCCCACGGTAAGACAATCGTTGTTTACGGAACTCGTTAA
ATGGTTCTAGGTAAACCTCAAACCGATCCAACATTAGAGTGGTTCCTTTCACACTGTCATATTCATAAGTACCCGTCAAA
AAGCACGCTGATCCACGCGGGCGAAAAAGCAGAGACTCTTTACTACATTGTTAAAGGTTCTGTTGCAGTACTTATCAAAG
ACGAAGAAGGTAAGGAAATGATCCTTTCTTACCTAAACCAAGGTGACTTTATCGGTGAACTTGGTTTATTCGAAGAAGAC
CAAGAGCGTACGGCATGGGTTCGTGCGAAATCTCCTTGTGAAGTAGCAGAAATTTCATTCAAGAAATTCCGTCAGCTAAT
CCAAGTTAACCCTGACATCCTAATGCGCCTGTCTGCACAAATGGCAAGCCGTCTACAGGTAACCAGTCAGAAAGTGGGTG
ACTTGGCATTCCTAGACGTAACAGGCCGCATCGCGCAAACACTGCTTAACCTGGCAAAACAGCCAGATGCAATGACACAC
CCAGACGGCATGCAGATCAAGATCACTCGTCAGGAAATCGGTCAGATTGTTGGCTGTTCTCGTGAAACAGTAGGTCGTAT
CTTGAAGATGCTAGAAGAGCAGAACCTAATTTCTGCCCACGGTAAGACAATCGTTGTTTACGGAACTCGTTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| crp | Vibrio cholerae strain A1552 |
97.619 |
100 |
0.976 |
| crp | Haemophilus influenzae Rd KW20 |
75 |
97.143 |
0.729 |
| crp | Acinetobacter baumannii D1279779 |
47.343 |
98.571 |
0.467 |