Detailed information
Bioinformatically predicted
Overview
| Name | qstR | Type | Regulator |
| Locus tag | VV93_RS13585 | Genome accession | NZ_CP009261 |
| Coordinates | 2951143..2951790 (+) | Length | 215 a.a. |
| NCBI ID | WP_011079388.1 | Uniprot ID | Q7MHB7 |
| Organism | Vibrio vulnificus strain 93U204 | ||
| Function | promote expression of competence genes (predicted from homology) Competence regulation |
||
Genomic Context
Location: 2946143..2956790
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| VV93_RS13570 (VV93_v1c26730) | - | 2946681..2948141 (-) | 1461 | WP_039554791.1 | hypothetical protein | - |
| VV93_RS13575 (VV93_v1c26740) | csrD | 2948154..2950151 (-) | 1998 | WP_181392229.1 | RNase E specificity factor CsrD | - |
| VV93_RS13580 (VV93_v1c26750) | ssb | 2950304..2950843 (-) | 540 | WP_011079389.1 | single-stranded DNA-binding protein | Machinery gene |
| VV93_RS13585 (VV93_v1c26760) | qstR | 2951143..2951790 (+) | 648 | WP_011079388.1 | response regulator transcription factor | Regulator |
| VV93_RS13590 (VV93_v1c26770) | galU | 2951976..2952848 (+) | 873 | WP_011079387.1 | UTP--glucose-1-phosphate uridylyltransferase GalU | - |
| VV93_RS13595 (VV93_v1c26780) | uvrA | 2952990..2955812 (+) | 2823 | WP_039554796.1 | excinuclease ABC subunit UvrA | - |
Sequence
Protein
Download Length: 215 a.a. Molecular weight: 24673.63 Da Isoelectric Point: 9.8565
>NTDB_id=127823 VV93_RS13585 WP_011079388.1 2951143..2951790(+) (qstR) [Vibrio vulnificus strain 93U204]
MRKSSYARKPFFISLQNEQTPEFVTVLAKQIQMEIPVITPATLMQADPNHRNRILLIDHQQHKVLLREIKNLPLIWKGFE
TVLCNVPSRLTTEELIGFGQCKAIFYRDTAITDMAKGLNSVINGKSWLPRDVSAQLIHYYRNMVCSHTSPVNVDLTMREI
QVLRCVQSGKSNSQIAEDLFISEFTVKSHLYQTFRKLSVKNRVQAAAWADQNLIS
MRKSSYARKPFFISLQNEQTPEFVTVLAKQIQMEIPVITPATLMQADPNHRNRILLIDHQQHKVLLREIKNLPLIWKGFE
TVLCNVPSRLTTEELIGFGQCKAIFYRDTAITDMAKGLNSVINGKSWLPRDVSAQLIHYYRNMVCSHTSPVNVDLTMREI
QVLRCVQSGKSNSQIAEDLFISEFTVKSHLYQTFRKLSVKNRVQAAAWADQNLIS
Nucleotide
Download Length: 648 bp
>NTDB_id=127823 VV93_RS13585 WP_011079388.1 2951143..2951790(+) (qstR) [Vibrio vulnificus strain 93U204]
ATGAGAAAATCTTCTTACGCGCGGAAGCCATTTTTTATCAGTTTGCAAAACGAACAAACTCCTGAGTTCGTCACGGTATT
AGCTAAACAGATTCAAATGGAGATCCCTGTGATTACCCCGGCAACGCTCATGCAAGCCGATCCCAATCATCGTAATCGCA
TCTTATTGATTGATCATCAGCAACATAAGGTGCTGTTGAGAGAGATTAAAAACCTACCGCTAATATGGAAGGGGTTTGAA
ACGGTCCTGTGTAATGTACCTAGCCGATTGACGACTGAGGAACTGATCGGTTTTGGCCAGTGCAAAGCGATCTTCTACCG
AGACACTGCCATTACAGACATGGCCAAAGGACTAAATTCGGTAATTAATGGCAAAAGCTGGCTGCCACGCGACGTCAGCG
CACAACTCATCCACTACTATCGAAATATGGTTTGTTCACACACTTCACCAGTGAATGTGGATCTCACGATGAGAGAAATT
CAAGTGTTACGCTGCGTGCAATCTGGCAAGTCAAATTCTCAAATCGCCGAAGATCTTTTCATTAGTGAATTCACCGTAAA
GTCGCATCTCTATCAAACCTTTAGAAAGCTCTCCGTGAAGAATCGTGTCCAAGCTGCCGCGTGGGCTGACCAAAATTTGA
TCTCATAA
ATGAGAAAATCTTCTTACGCGCGGAAGCCATTTTTTATCAGTTTGCAAAACGAACAAACTCCTGAGTTCGTCACGGTATT
AGCTAAACAGATTCAAATGGAGATCCCTGTGATTACCCCGGCAACGCTCATGCAAGCCGATCCCAATCATCGTAATCGCA
TCTTATTGATTGATCATCAGCAACATAAGGTGCTGTTGAGAGAGATTAAAAACCTACCGCTAATATGGAAGGGGTTTGAA
ACGGTCCTGTGTAATGTACCTAGCCGATTGACGACTGAGGAACTGATCGGTTTTGGCCAGTGCAAAGCGATCTTCTACCG
AGACACTGCCATTACAGACATGGCCAAAGGACTAAATTCGGTAATTAATGGCAAAAGCTGGCTGCCACGCGACGTCAGCG
CACAACTCATCCACTACTATCGAAATATGGTTTGTTCACACACTTCACCAGTGAATGTGGATCTCACGATGAGAGAAATT
CAAGTGTTACGCTGCGTGCAATCTGGCAAGTCAAATTCTCAAATCGCCGAAGATCTTTTCATTAGTGAATTCACCGTAAA
GTCGCATCTCTATCAAACCTTTAGAAAGCTCTCCGTGAAGAATCGTGTCCAAGCTGCCGCGTGGGCTGACCAAAATTTGA
TCTCATAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| qstR | Vibrio parahaemolyticus RIMD 2210633 |
60.93 |
100 |
0.609 |
| qstR | Vibrio campbellii strain DS40M4 |
60.93 |
100 |
0.609 |
| qstR | Vibrio cholerae strain A1552 |
47.196 |
99.535 |
0.47 |