Detailed information NTG0127785

Bioinformatically predicted

Overview

• Name: dprA
• Type: Machinery gene
• Locus tag: HPYLSS1_RS01680
• Genome accession: NZ_CP009259
• Coordinates: 336250..337050 (+)
• Length: 266 a.a.
• NCBI ID: WP_077231809.1
• Uniprot ID: -
• Organism: Helicobacter pylori SS1
• Function: ssDNA binding; loading RecA onto ssDNA (predicted from homology) DNA processing

Genomic Context

Location: 331250..342050

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
HPYLSS1_RS01645 (HPYLSS1_00315)	pseH	331750..332292 (+)	543	WP_077231805.1	UDP-4-amino-4, 6-dideoxy-N-acetyl-beta-L-altrosamine N-acetyltransferase	-
HPYLSS1_RS01650 (HPYLSS1_00316)	-	332225..333163 (-)	939	WP_077231806.1	tetraacyldisaccharide 4'-kinase	-
HPYLSS1_RS01655 (HPYLSS1_00317)	-	333160..333942 (-)	783	WP_077231807.1	NAD+ synthase	-
HPYLSS1_RS01665 (HPYLSS1_00319)	ilvC	334191..335183 (+)	993	WP_077231808.1	ketol-acid reductoisomerase	-
HPYLSS1_RS01670 (HPYLSS1_00320)	minD	335207..336013 (+)	807	WP_001019051.1	septum site-determining protein MinD	-
HPYLSS1_RS01675 (HPYLSS1_00321)	minE	336010..336243 (+)	234	WP_000051430.1	cell division topological specificity factor MinE	-
HPYLSS1_RS01680 (HPYLSS1_00322)	dprA	336250..337050 (+)	801	WP_077231809.1	DNA-processing protein DprA	Machinery gene
HPYLSS1_RS01685 (HPYLSS1_00323)	dprB	337047..337451 (+)	405	WP_077231810.1	Holliday junction resolvase RuvX	Machinery gene
HPYLSS1_RS01690	-	337577..338153 (+)	577	Protein_315	tetratricopeptide repeat protein	-
HPYLSS1_RS01695 (HPYLSS1_00326)	-	338341..338679 (+)	339	WP_077231811.1	hypothetical protein	-
HPYLSS1_RS01700 (HPYLSS1_00327)	-	338663..339223 (+)	561	WP_077231812.1	hypothetical protein	-
HPYLSS1_RS01705 (HPYLSS1_00328)	-	339336..340217 (-)	882	WP_077231813.1	RluA family pseudouridine synthase	-
HPYLSS1_RS01710 (HPYLSS1_00329)	recJ	340217..341767 (-)	1551	WP_077231814.1	single-stranded-DNA-specific exonuclease RecJ	-

Sequence

Protein

• Length: 266 a.a.
• Molecular weight: 29845.82 Da
• Isoelectric Point: 8.5826

>NTDB_id=127785 HPYLSS1_RS01680 WP_077231809.1 336250..337050(+) (dprA) [Helicobacter pylori SS1]
MKSHFQYSALENIPKAFDILKDPPKKLYCVGDTKLLEAPLKVAIIGTRRPTPYSKQHTITLARELAKNGAVIVSGGALGV
DIIAQENALPKTIMLSPCSLDLIYPTNNHKVIQEIAQNGLILSEYEKDFMPVKGSFLARNRLVIALSDVVIIPQADLKSG
SMSSARLAQKYQKPLFVLPQRLNESDGTNELLEKGQAQGIFNIQNFINTLLKDYHLKEMPEMKDEFLEYCAKNPSYEEAY
LKFGDKLLEYELLGKIKRINHLVVLA

Nucleotide

• Length: 801 bp

>NTDB_id=127785 HPYLSS1_RS01680 WP_077231809.1 336250..337050(+) (dprA) [Helicobacter pylori SS1]
ATGAAAAGCCATTTCCAATACAGCGCGCTAGAGAATATCCCTAAAGCCTTTGACATTCTCAAAGACCCCCCTAAAAAGCT
CTATTGTGTGGGCGATACCAAGCTTTTAGAAGCGCCTTTAAAAGTGGCTATCATCGGCACAAGAAGACCCACCCCTTACA
GCAAGCAACACACGATCACTCTAGCCAGAGAGCTTGCTAAAAATGGCGCGGTTATTGTGAGTGGGGGAGCGTTAGGCGTG
GATATTATCGCTCAAGAAAACGCCTTACCAAAAACCATCATGCTTTCGCCTTGCAGTTTGGATTTGATCTATCCTACGAA
CAACCATAAAGTGATCCAAGAAATCGCGCAAAACGGCTTGATTTTAAGCGAATATGAAAAAGACTTCATGCCCGTTAAAG
GCTCTTTTTTAGCGAGAAACCGCCTGGTGATCGCTTTAAGCGATGTAGTGATTATCCCCCAAGCGGATTTAAAAAGCGGC
TCTATGAGCAGCGCGAGATTAGCCCAAAAATACCAAAAACCCTTGTTTGTTTTGCCTCAGCGCTTAAATGAGAGCGATGG
CACTAATGAGCTTTTAGAAAAAGGGCAGGCTCAAGGGATATTTAATATTCAAAATTTTATAAACACCCTTTTAAAAGACT
ACCATTTAAAAGAAATGCCTGAAATGAAAGATGAATTTTTAGAATATTGCGCCAAAAACCCTAGCTATGAAGAGGCGTAT
CTCAAATTTGGGGATAAGCTTTTAGAATACGAGCTGTTGGGTAAGATCAAGCGCATCAATCATCTCGTGGTGTTAGCATG
A

Domains

Predicted by InterproScan.

• DNA recombination-mediator protein A (DNA_processg_A) (12-197)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
dprA	Helicobacter pylori 26695	97.368	100	0.974
dprA	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	48.23	84.962	0.41