Detailed information NTG0127703

Bioinformatically predicted

Overview

• Name: pilY2
• Type: Machinery gene
• Locus tag: IX87_RS12335
• Genome accession: NZ_CP009257
• Coordinates: 2432316..2432798 (-)
• Length: 160 a.a.
• NCBI ID: WP_001046417.1
• Uniprot ID: -
• Organism: Acinetobacter baumannii strain AB30
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2427316..2437798

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
IX87_RS12300 (IX87_12570)	-	2427423..2428457 (+)	1035	WP_001189451.1	lipase secretion chaperone	-
IX87_RS12305 (IX87_12575)	-	2428572..2429513 (+)	942	WP_144242909.1	triacylglycerol lipase	-
IX87_RS12310 (IX87_12580)	rplS	2429566..2429934 (-)	369	WP_000014562.1	50S ribosomal protein L19	-
IX87_RS12315 (IX87_12585)	trmD	2430142..2430882 (-)	741	WP_000464596.1	tRNA (guanosine(37)-N1)-methyltransferase TrmD	-
IX87_RS12320 (IX87_12590)	rimM	2430928..2431476 (-)	549	WP_000189236.1	ribosome maturation factor RimM	-
IX87_RS12325 (IX87_12595)	rpsP	2431496..2431747 (-)	252	WP_000260334.1	30S ribosomal protein S16	-
IX87_RS12330 (IX87_12600)	pilE	2431894..2432319 (-)	426	WP_000788342.1	type IV pilin protein	Machinery gene
IX87_RS12335 (IX87_12605)	pilY2	2432316..2432798 (-)	483	WP_001046417.1	type IV pilin protein	Machinery gene
IX87_RS12340 (IX87_12610)	pilY1	2432811..2436665 (-)	3855	WP_000768966.1	PilC/PilY family type IV pilus protein	Machinery gene
IX87_RS12345 (IX87_12615)	pilX	2436677..2437495 (-)	819	WP_000149374.1	PilX N-terminal domain-containing pilus assembly protein	Machinery gene

Sequence

Protein

• Length: 160 a.a.
• Molecular weight: 17516.77 Da
• Isoelectric Point: 8.4817

>NTDB_id=127703 IX87_RS12335 WP_001046417.1 2432316..2432798(-) (pilY2) [Acinetobacter baumannii strain AB30]
MNKYSILRFNQGVTLIELMVVIVIVAIFASIAIPSYQSYSRRATASAAKSEILKLAEQLEQHKSRNFTYRGFTTTSITLP
RGGYTIQITDDTTTGNLLTNAAANGQTWVIKATTTDSRNFNFIAKNSGLRCQSLTATAVDNDCGGTVTCNVCETNSENWQ

Nucleotide

• Length: 483 bp

>NTDB_id=127703 IX87_RS12335 WP_001046417.1 2432316..2432798(-) (pilY2) [Acinetobacter baumannii strain AB30]
ATGAATAAGTACTCTATTCTACGGTTCAATCAAGGGGTTACCTTGATTGAGCTTATGGTCGTGATTGTTATCGTTGCTAT
TTTTGCTTCAATTGCTATCCCTTCATATCAAAGTTATAGCCGTAGAGCTACTGCATCTGCGGCTAAAAGTGAAATTTTGA
AATTAGCTGAACAATTGGAACAGCATAAATCAAGAAATTTTACTTATAGGGGGTTTACCACAACCTCTATAACCCTACCT
CGCGGGGGATATACGATTCAGATTACTGATGATACGACGACAGGAAATTTATTGACGAATGCTGCTGCAAATGGACAAAC
ATGGGTCATTAAAGCGACAACTACAGATTCAAGAAACTTTAATTTTATTGCTAAGAATTCAGGTTTGCGTTGTCAAAGTT
TAACAGCTACGGCTGTTGATAATGACTGTGGTGGAACAGTCACTTGCAATGTATGTGAAACAAATAGTGAGAATTGGCAA
TGA

Domains

Predicted by InterproScan.

• Type IV minor pilin ComP, DNA uptake sequence receptor (ComP_DUS) (34-115)

• Prokaryotic N-terminal methylation motif (N_methyl) (10-32)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilY2	Acinetobacter baumannii D1279779	98.125	100	0.981
comE	Acinetobacter baylyi ADP1	41.279	100	0.444