Detailed information NTG0127643

Bioinformatically predicted

Overview

• Name: pilY2
• Type: Machinery gene
• Locus tag: IX88_RS00580
• Genome accession: NZ_CP009256
• Coordinates: 107340..107822 (-)
• Length: 160 a.a.
• NCBI ID: WP_001046424.1
• Uniprot ID: -
• Organism: Acinetobacter baumannii strain AB31
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 102340..112822

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
IX88_RS00545 (IX88_00555)	-	102449..103480 (+)	1032	WP_002007674.1	lipase secretion chaperone	-
IX88_RS00550 (IX88_00560)	-	103595..104536 (+)	942	WP_085916958.1	triacylglycerol lipase	-
IX88_RS00555 (IX88_00565)	rplS	104589..104957 (-)	369	WP_000014562.1	50S ribosomal protein L19	-
IX88_RS00560 (IX88_00570)	trmD	105166..105906 (-)	741	WP_000464598.1	tRNA (guanosine(37)-N1)-methyltransferase TrmD	-
IX88_RS00565 (IX88_00575)	rimM	105952..106500 (-)	549	WP_000189236.1	ribosome maturation factor RimM	-
IX88_RS00570 (IX88_00580)	rpsP	106520..106771 (-)	252	WP_000260334.1	30S ribosomal protein S16	-
IX88_RS00575 (IX88_00585)	pilE	106918..107343 (-)	426	WP_031999633.1	type IV pilin protein	Machinery gene
IX88_RS00580 (IX88_00590)	pilY2	107340..107822 (-)	483	WP_001046424.1	type IV pilin protein	Machinery gene
IX88_RS00585 (IX88_00595)	pilY1	107835..111689 (-)	3855	WP_000768946.1	PilC/PilY family type IV pilus protein	Machinery gene
IX88_RS00590 (IX88_00600)	pilX	111701..112519 (-)	819	WP_000149374.1	PilX N-terminal domain-containing pilus assembly protein	Machinery gene

Sequence

Protein

• Length: 160 a.a.
• Molecular weight: 17577.81 Da
• Isoelectric Point: 8.4834

>NTDB_id=127643 IX88_RS00580 WP_001046424.1 107340..107822(-) (pilY2) [Acinetobacter baumannii strain AB31]
MNKYSILRFNQGVTLIELMVVIVIVAIFTSIAIPSYQSYSRRATASAAKSEILKLAEQLEQHKSRNFTYRGFTTTSITLP
RGGYTIQITDDTTTGNLLTNSAANGQTWVIRATTTDSRNFNFIAKNSGIRCQSLTVTAVDNDCGGTTTCNTCEANSEVWQ

Nucleotide

• Length: 483 bp

>NTDB_id=127643 IX88_RS00580 WP_001046424.1 107340..107822(-) (pilY2) [Acinetobacter baumannii strain AB31]
ATGAATAAGTACTCTATTCTACGGTTCAATCAAGGGGTTACCTTGATTGAGCTTATGGTCGTGATTGTTATCGTTGCTAT
TTTTACTTCAATTGCTATCCCTTCATATCAAAGTTATAGCCGTAGAGCTACTGCATCTGCGGCTAAAAGTGAAATTTTGA
AATTAGCTGAACAATTAGAACAGCATAAATCAAGAAATTTTACTTATAGGGGTTTTACCACAACCTCTATAACCCTACCT
CGCGGGGGATATACGATTCAGATTACTGATGATACGACCACAGGTAATTTATTAACAAATTCTGCTGCTAATGGTCAAAC
ATGGGTAATTAGAGCAACCACAACAGATTCGAGAAATTTTAATTTTATTGCTAAAAATTCAGGTATACGTTGTCAAAGTT
TAACAGTTACAGCCGTTGATAATGATTGTGGTGGAACGACTACTTGTAATACATGTGAAGCGAACAGTGAGGTTTGGCAG
TGA

Domains

Predicted by InterproScan.

• Prokaryotic N-terminal methylation motif (N_methyl) (10-32)

• Type IV minor pilin ComP, DNA uptake sequence receptor (ComP_DUS) (34-127)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilY2	Acinetobacter baumannii D1279779	93.125	100	0.931
comE	Acinetobacter baylyi ADP1	38.953	100	0.419