Detailed information NTG0124804

Bioinformatically predicted

Overview

• Name: priA
• Type: Machinery gene
• Locus tag: RDF_RS01925
• Genome accession: NZ_CP010867
• Coordinates: 332044..334434 (+)
• Length: 796 a.a.
• NCBI ID: WP_000101528.1
• Uniprot ID: Q8E1N9
• Organism: Streptococcus agalactiae strain SS1
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 327044..339434

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
RDF_RS01895 (RDF_0313)	-	327669..328409 (+)	741	WP_001217938.1	ABC transporter permease	-
RDF_RS01900 (RDF_0314)	-	328406..329491 (+)	1086	WP_000791349.1	sensor histidine kinase	-
RDF_RS01905 (RDF_0315)	-	329493..330083 (+)	591	WP_029550621.1	response regulator transcription factor	-
RDF_RS01910 (RDF_0316)	-	330133..330837 (+)	705	WP_001168922.1	TMEM175 family protein	-
RDF_RS01915 (RDF_0317)	gmk	331004..331633 (+)	630	WP_000003861.1	guanylate kinase	-
RDF_RS01920 (RDF_0318)	rpoZ	331656..331970 (+)	315	WP_000979239.1	DNA-directed RNA polymerase subunit omega	-
RDF_RS01925 (RDF_0319)	priA	332044..334434 (+)	2391	WP_000101528.1	primosomal protein N'	Machinery gene
RDF_RS01930 (RDF_0320)	fmt	334481..335416 (+)	936	WP_000163893.1	methionyl-tRNA formyltransferase	-
RDF_RS01935 (RDF_0321)	rsmB	335406..336728 (+)	1323	WP_001262604.1	16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB	-
RDF_RS01940 (RDF_0322)	-	336766..337503 (+)	738	WP_000406233.1	Stp1/IreP family PP2C-type Ser/Thr phosphatase	-

Sequence

Protein

• Length: 796 a.a.
• Molecular weight: 91170.95 Da
• Isoelectric Point: 8.6523

>NTDB_id=124804 RDF_RS01925 WP_000101528.1 332044..334434(+) (priA) [Streptococcus agalactiae strain SS1]
MARKLAQVIVDIPLMQTDKPFSYAIPKDLEDLVQVGVRVHVPFGRGNRLLQGFVVGFRDDDELETKDIAEVLDFEPVLNQ
EQLDLADQMRHTVFSYKISILKSMLPSLLNSQYDKLLLATDTLPSEDREDLFGHKTEIVFSSLSSQDAKKAGRLIQKGFI
EVQYLAKDKKTIKTEKIYKINRTLLEKSQIAARAKKRLELKEFLLENPQPGRLTALNKQFSSPVVNFFREEGIIEVIEKE
ASRSDNYFKGILKTDFLDLNQEQAKVVKIVVDQIGKEQNKPFLLEGITGSGKTEVYLHIIDNVLKLGKTAIVLVPEISLT
PQMTNRFISRFGKQVAIMHSGLSEGEKFDEWRKIKSGQAKVVVGARSAIFAPLENIGAIIIDEEHESTYKQESNPRYHAR
DVALLRAEYYKAVLLMGSATPSIESRARASRDVYKFLELKHRANPKARIPQVEIIDFRNFIGQQEVSNFTSYLLDKIRDR
LDKKEQVVLMLNRRGYSSFIMCRDCGYVDQCPNCDISLTLHMATKTMNCHYCGFEKPIPRTCPNCNSKSISYYGTGTQKA
YEELLKVIPDAKILRMDVDTTRQKGGHESILKRFGNHEADILLGTQMIAKGLDFPNVTLVGVLNADTSLNLPDFRSSERT
FQLLTQVAGRAGRAEKEGEVVIQTYNPNHYAIQLAQKQDFEAFYQYEMNIRRQLGYPPYYFTVGLTLSHKDEEWLIRKSY
EVLSLLKQGFSDKVKLLGPTPKPIARTHNLYHYQIIIKYRFEDNLELVLNRLLDMTQDKENRDLRLAIDHEPQNMM

Nucleotide

• Length: 2391 bp

>NTDB_id=124804 RDF_RS01925 WP_000101528.1 332044..334434(+) (priA) [Streptococcus agalactiae strain SS1]
ATGGCAAGAAAATTAGCACAGGTTATTGTTGATATTCCTCTGATGCAGACAGATAAACCATTTTCGTATGCCATTCCTAA
AGATTTGGAAGATTTGGTACAAGTAGGAGTACGCGTTCATGTTCCTTTTGGAAGAGGAAATCGTCTTTTGCAAGGCTTTG
TTGTCGGTTTCAGAGATGATGATGAATTAGAGACTAAGGATATTGCGGAGGTCCTAGATTTTGAACCTGTTTTAAATCAG
GAACAACTAGACTTAGCTGATCAGATGCGCCATACTGTCTTTTCTTATAAAATATCTATTTTGAAATCAATGTTACCAAG
TCTTTTGAATTCGCAATATGATAAACTCTTGTTAGCAACAGACACATTACCATCAGAAGATAGAGAAGATCTATTTGGTC
ATAAAACGGAAATTGTCTTTTCAAGTTTGTCTTCTCAAGATGCCAAAAAAGCAGGCAGATTAATTCAAAAAGGTTTCATA
GAAGTTCAATATTTAGCCAAAGATAAGAAAACAATAAAAACAGAAAAGATTTACAAAATCAACAGAACTCTGTTAGAAAA
GAGCCAAATAGCAGCAAGAGCGAAAAAGAGACTGGAGTTGAAAGAATTCCTGTTAGAAAATCCTCAACCAGGGCGCCTCA
CAGCTTTAAACAAACAATTTTCATCTCCTGTGGTTAATTTTTTCAGAGAAGAAGGAATCATTGAAGTCATTGAAAAAGAA
GCTAGTAGATCTGATAATTATTTTAAAGGAATCCTAAAAACGGATTTTTTGGATTTAAATCAGGAACAAGCTAAAGTAGT
TAAAATAGTTGTTGACCAAATTGGTAAGGAACAGAATAAACCCTTCTTGTTGGAGGGGATTACAGGGTCTGGTAAGACAG
AGGTATATCTTCATATCATTGATAACGTTTTAAAGTTGGGAAAAACAGCGATTGTTCTCGTTCCAGAAATTTCTTTAACT
CCCCAGATGACGAATCGTTTTATTTCTCGTTTTGGAAAGCAAGTTGCTATTATGCACTCGGGCTTGTCAGAAGGTGAAAA
ATTTGATGAGTGGCGAAAGATAAAATCAGGTCAAGCTAAAGTTGTCGTTGGAGCTCGTTCAGCAATTTTTGCTCCTTTGG
AAAATATCGGAGCCATCATTATAGATGAGGAACATGAATCAACTTATAAGCAAGAATCTAACCCAAGGTATCATGCGCGC
GATGTGGCCTTGCTACGTGCAGAATATTATAAAGCTGTGTTACTAATGGGATCAGCAACTCCAAGTATCGAAAGCCGAGC
TAGAGCTAGTCGGGATGTTTATAAATTTTTAGAATTAAAACATCGTGCTAATCCTAAAGCACGTATTCCTCAGGTTGAAA
TTATTGATTTTAGAAATTTTATTGGTCAACAAGAAGTTAGTAATTTCACATCATATTTACTAGATAAAATCCGAGATAGA
TTAGATAAGAAAGAGCAAGTGGTTCTTATGCTCAATCGTAGAGGTTATTCTAGTTTTATTATGTGTCGAGACTGCGGCTA
CGTTGATCAATGTCCTAATTGTGACATTTCTCTGACTTTACATATGGCTACAAAGACCATGAATTGTCATTATTGTGGGT
TTGAAAAGCCTATTCCAAGAACATGTCCAAATTGCAATAGTAAAAGTATCTCTTACTATGGTACTGGAACCCAAAAAGCT
TATGAAGAACTTTTGAAAGTTATCCCAGACGCAAAGATTTTACGGATGGATGTTGATACGACAAGGCAAAAAGGCGGTCA
TGAGTCTATTTTGAAGCGTTTCGGAAATCATGAAGCTGATATTTTATTGGGAACACAGATGATTGCTAAGGGATTGGATT
TTCCAAATGTTACTTTAGTTGGAGTACTAAATGCAGATACTTCTCTGAATTTACCTGATTTTCGATCATCAGAGCGAACT
TTTCAGCTATTAACTCAAGTGGCTGGACGTGCTGGGCGTGCTGAAAAAGAAGGAGAGGTTGTCATTCAAACTTATAATCC
TAATCATTATGCTATTCAATTAGCCCAAAAGCAAGATTTTGAAGCTTTTTATCAATATGAAATGAATATCCGTCGACAAC
TTGGTTATCCTCCTTATTATTTTACAGTTGGTTTAACATTATCGCATAAAGATGAAGAGTGGTTAATACGAAAATCTTAT
GAAGTATTAAGTTTATTGAAGCAAGGCTTTAGTGATAAAGTAAAGTTGTTAGGTCCAACGCCAAAACCAATTGCAAGAAC
ACATAACCTTTATCACTACCAAATTATTATCAAGTATCGATTTGAGGACAACCTTGAACTTGTTTTGAATCGCTTATTAG
ACATGACTCAAGACAAGGAGAATAGAGATCTTCGCTTAGCAATAGACCACGAACCGCAAAATATGATGTAG

Domains

Predicted by InterProScan.

• Primosomal protein N C-terminal domain (PriA_C) (698-792)

• Type III restriction enzyme, res subunit (ResIII) (258-422)

• 3DNA-binding domain (3BD) (PriA_3primeBD) (7-106)

• Helicase conserved C-terminal domain (Helicase_C) (571-654)

• PriA DNA helicase Cys-rich region (CRR) domain (Zn_ribbon_PriA) (511-537)

3D structure

• AlphaFold DB: Q8E1N9

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
priA	Bacillus subtilis subsp. subtilis str. 168	46.906	100	0.476