Detailed information    

insolico Bioinformatically predicted

Overview


Name   pilG   Type   Regulator
Locus tag   EG09_RS19470 Genome accession   NZ_CP010555
Coordinates   4259288..4259695 (+) Length   135 a.a.
NCBI ID   WP_003084583.1    Uniprot ID   A0A0H2ZL28
Organism   Pseudomonas aeruginosa strain FRD1     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context


Location: 4254288..4264695
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  EG09_RS19440 (EG09_19440) - 4254336..4255340 (-) 1005 WP_003084569.1 aspartate carbamoyltransferase catalytic subunit -
  EG09_RS19445 (EG09_19445) pyrR 4255364..4255876 (-) 513 WP_003084574.1 bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR -
  EG09_RS19450 (EG09_19450) ruvX 4255988..4256422 (-) 435 WP_003084575.1 Holliday junction resolvase RuvX -
  EG09_RS19455 (EG09_19455) - 4256422..4256991 (-) 570 WP_003100947.1 YqgE/AlgH family protein -
  EG09_RS19460 (EG09_19460) - 4257040..4257933 (-) 894 WP_015649761.1 energy transducer TonB -
  EG09_RS19465 (EG09_19465) gshB 4258080..4259033 (-) 954 WP_003100943.1 glutathione synthase -
  EG09_RS19470 (EG09_19470) pilG 4259288..4259695 (+) 408 WP_003084583.1 twitching motility response regulator PilG Regulator
  EG09_RS19475 (EG09_19475) pilH 4259742..4260107 (+) 366 WP_003084587.1 twitching motility response regulator PilH Machinery gene
  EG09_RS19480 (EG09_19480) - 4260158..4260694 (+) 537 WP_003084590.1 chemotaxis protein CheW -
  EG09_RS19485 (EG09_19485) pilJ 4260779..4262827 (+) 2049 WP_003084592.1 chemotaxis chemoreceptor PilJ -
  EG09_RS19490 (EG09_19490) pilK 4262888..4263763 (+) 876 WP_003100938.1 type 4 fimbrial methyltransferase PilK -

Sequence


Protein


Download         Length: 135 a.a.        Molecular weight: 14718.11 Da        Isoelectric Point: 7.1340

>NTDB_id=124092 EG09_RS19470 WP_003084583.1 4259288..4259695(+) (pilG) [Pseudomonas aeruginosa strain FRD1]
MEQQSDGLKVMVIDDSKTIRRTAETLLKKVGCDVITAIDGFDALAKIADTHPNIIFVDIMMPRLDGYQTCALIKNNSAFK
STPVIMLSSKDGLFDKAKGRIVGSDQYLTKPFSKEELLGAIKAHVPSFTPVDAVS

Nucleotide


Download         Length: 408 bp        

>NTDB_id=124092 EG09_RS19470 WP_003084583.1 4259288..4259695(+) (pilG) [Pseudomonas aeruginosa strain FRD1]
ATGGAACAGCAATCCGACGGTTTGAAAGTGATGGTGATCGACGATTCGAAAACGATTCGTCGCACCGCCGAAACACTGCT
GAAAAAGGTCGGTTGCGACGTGATCACGGCAATCGACGGCTTCGATGCCCTGGCGAAGATCGCCGATACCCATCCGAACA
TCATTTTCGTCGACATCATGATGCCGCGCCTGGATGGCTATCAGACCTGCGCCCTGATCAAGAACAACAGCGCGTTCAAG
TCCACCCCGGTGATCATGCTGTCCTCCAAGGACGGCCTGTTCGACAAGGCCAAGGGGCGCATCGTCGGCTCCGACCAGTA
CCTCACCAAGCCGTTCAGCAAGGAAGAGCTGCTGGGCGCGATCAAGGCACACGTACCCAGCTTCACCCCGGTGGACGCCG
TTTCCTGA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A0H2ZL28

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

74.803

94.074

0.704

  vicR Streptococcus mutans UA159

44.444

86.667

0.385


Multiple sequence alignment