Detailed information    

insolico Bioinformatically predicted

Overview

Name   ccpA   Type   Regulator
Locus tag   FE90_RS07315 Genome accession   NZ_CP008695
Coordinates   1444569..1445570 (-) Length   333 a.a.
NCBI ID   WP_038433662.1    Uniprot ID   -
Organism   Streptococcus pyogenes strain M23ND     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 1439569..1450570
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FE90_RS07300 (FE90_1466) thrS 1439739..1441682 (-) 1944 WP_038433659.1 threonine--tRNA ligase -
  FE90_RS07305 (FE90_1467) - 1442104..1443438 (-) 1335 WP_038433660.1 glycosyltransferase family 4 protein -
  FE90_RS07310 (FE90_1468) - 1443440..1444438 (-) 999 WP_038433661.1 glycosyltransferase family 4 protein -
  FE90_RS07315 (FE90_1469) ccpA 1444569..1445570 (-) 1002 WP_038433662.1 catabolite control protein A Regulator
  FE90_RS07320 (FE90_1470) - 1445744..1446829 (+) 1086 WP_002985682.1 aminopeptidase P family protein -
  FE90_RS07325 (FE90_1471) - 1446878..1447543 (+) 666 WP_002985684.1 NAD(P)H-dependent oxidoreductase -
  FE90_RS07330 (FE90_1472) - 1447554..1447931 (+) 378 WP_002985686.1 VOC family protein -
  FE90_RS07335 (FE90_1473) - 1448076..1449002 (+) 927 WP_038433663.1 glycosyltransferase family 2 protein -
  FE90_RS07340 (FE90_1474) - 1449213..1449896 (+) 684 WP_011017476.1 DUF969 domain-containing protein -

Sequence

Protein


Download         Length: 333 a.a.        Molecular weight: 36699.76 Da        Isoelectric Point: 5.7243

>NTDB_id=123602 FE90_RS07315 WP_038433662.1 1444569..1445570(-) (ccpA) [Streptococcus pyogenes strain M23ND]
MNTDDTITIYDVAREAGVSMATVSRVVNGNKNVKENTRKKVLEVIDRLDYRPNAVARGLASKKTTTVGVVIPNIANSYFS
ILAKGIDDIAAMYNYNIVLASSDEDDDKEVNVVNTLFAKQVDGIIFMGHHLTEKIRAEFSRSRTPVVLAGTVDLDHQLPS
VNIDYRAAVSNVVDILAENHKCIAFVSGPLIDDINGKVRLAGYKEGLKHNKLDFKEGLVFEANYSYKEGFELAQRVINSG
ATAAYVAEDELAAGLLNGLFEAGKRVPEDFEIITSNDSPVVQYTRPNLSSISQPVYDLGAVSMRMLTKIMNKEELEEKEI
LLNHGIKKRGTTK

Nucleotide


Download         Length: 1002 bp        

>NTDB_id=123602 FE90_RS07315 WP_038433662.1 1444569..1445570(-) (ccpA) [Streptococcus pyogenes strain M23ND]
ATGAATACAGATGATACCATTACAATTTATGATGTTGCCCGTGAAGCTGGTGTTTCAATGGCAACCGTTAGCCGTGTTGT
TAATGGCAATAAAAATGTTAAGGAAAATACACGTAAGAAAGTTTTAGAAGTTATTGATCGCCTTGACTATCGTCCCAATG
CTGTCGCGCGTGGTCTCGCCAGCAAAAAGACAACAACCGTTGGCGTTGTGATTCCAAATATTGCAAATAGTTATTTTTCT
ATCTTAGCTAAGGGTATTGACGATATCGCCGCTATGTACAACTATAATATTGTGCTTGCCTCCAGTGATGAAGATGATGA
CAAGGAGGTTAATGTTGTCAATACCCTTTTTGCCAAGCAAGTGGATGGTATTATTTTTATGGGGCATCACTTGACAGAAA
AAATCCGGGCCGAATTTTCACGCTCTCGTACTCCAGTTGTTTTGGCAGGAACTGTAGATCTTGATCATCAATTACCAAGC
GTCAACATTGACTATAGAGCTGCGGTGTCAAACGTTGTTGATATTTTAGCTGAAAATCATAAGTGTATCGCTTTTGTGTC
AGGACCACTCATTGATGATATCAATGGTAAAGTGCGCTTAGCAGGGTACAAAGAAGGATTGAAGCACAATAAGCTTGACT
TCAAAGAAGGTCTTGTTTTTGAAGCGAACTATTCTTATAAAGAAGGATTTGAATTGGCGCAGCGCGTCATTAACTCAGGA
GCAACAGCGGCTTATGTGGCTGAAGATGAATTGGCAGCAGGCCTTTTAAACGGCTTGTTTGAAGCAGGTAAACGCGTACC
AGAGGACTTTGAAATCATCACCAGCAACGATTCACCAGTGGTTCAATACACTCGTCCCAATTTGAGTTCTATCAGTCAAC
CTGTTTATGACTTAGGTGCTGTTAGCATGCGGATGTTGACTAAAATCATGAACAAAGAAGAGTTGGAAGAAAAAGAAATT
CTTTTGAATCATGGTATTAAAAAACGTGGGACAACTAAGTAA

Domains

Predicted by InterproScan.

Bacterial regulatory proteins, lacI family (LacI)

(8-53)

Periplasmic binding protein-like domain (Peripla_BP_3)

(177-332)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ccpA Streptococcus gordonii str. Challis substr. CH1

77.778

100

0.778
  ccpA Streptococcus pneumoniae D39

75.075

100

0.751
  ccpA Lactococcus lactis subsp. lactis strain DGCC12653

55.891

99.399

0.556

Multiple sequence alignment