Detailed information
Bioinformatically predicted
Overview
| Name | degU | Type | Regulator |
| Locus tag | BMMGA3_RS14555 | Genome accession | NZ_CP007739 |
| Coordinates | 2979282..2979965 (-) | Length | 227 a.a. |
| NCBI ID | WP_038502319.1 | Uniprot ID | A0A068LUS3 |
| Organism | Bacillus methanolicus MGA3 | ||
| Function | activation of comK (predicted from homology) Competence regulation |
||
Genomic Context
Location: 2974282..2984965
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| BMMGA3_RS14535 (BMMGA3_15020) | - | 2974778..2975497 (-) | 720 | WP_003346465.1 | ComF family protein | - |
| BMMGA3_RS14540 (BMMGA3_15025) | - | 2975494..2976990 (-) | 1497 | WP_003346467.1 | DEAD/DEAH box helicase | - |
| BMMGA3_RS14545 (BMMGA3_15030) | - | 2977014..2977973 (-) | 960 | WP_038502316.1 | hypothetical protein | - |
| BMMGA3_RS14550 (BMMGA3_15035) | - | 2978146..2978985 (-) | 840 | WP_034669156.1 | DegV family protein | - |
| BMMGA3_RS14555 (BMMGA3_15040) | degU | 2979282..2979965 (-) | 684 | WP_038502319.1 | response regulator | Regulator |
| BMMGA3_RS14560 (BMMGA3_15045) | degS | 2980005..2981144 (-) | 1140 | WP_003346477.1 | sensor histidine kinase | Regulator |
| BMMGA3_RS14565 (BMMGA3_15050) | - | 2981536..2982168 (+) | 633 | WP_003346479.1 | YigZ family protein | - |
| BMMGA3_RS14570 (BMMGA3_15055) | - | 2982273..2983301 (+) | 1029 | WP_034669139.1 | LCP family protein | - |
Sequence
Protein
Download Length: 227 a.a. Molecular weight: 25536.10 Da Isoelectric Point: 5.7793
>NTDB_id=123016 BMMGA3_RS14555 WP_038502319.1 2979282..2979965(-) (degU) [Bacillus methanolicus MGA3]
MTTKIVIIDDHQLFREGVKRILDFEKSFEVVAEGDDGKDAIHLVEQYHPDVVIMDINMPHTNGIEATQQLIEKYPESRVI
ILSIHDDENYVTHALKTGASGYLLKEMDADALVEAVKVVAEGGSYIHPKVTHNLVKEYRRLATETGNGESYPPNGEIRRP
LHLLTRRECEVLQLLADGKSNLGFGEALFISEKTVKNHVSNILQKMNVNDRTQAVVVAIKNGWVEVR
MTTKIVIIDDHQLFREGVKRILDFEKSFEVVAEGDDGKDAIHLVEQYHPDVVIMDINMPHTNGIEATQQLIEKYPESRVI
ILSIHDDENYVTHALKTGASGYLLKEMDADALVEAVKVVAEGGSYIHPKVTHNLVKEYRRLATETGNGESYPPNGEIRRP
LHLLTRRECEVLQLLADGKSNLGFGEALFISEKTVKNHVSNILQKMNVNDRTQAVVVAIKNGWVEVR
Nucleotide
Download Length: 684 bp
>NTDB_id=123016 BMMGA3_RS14555 WP_038502319.1 2979282..2979965(-) (degU) [Bacillus methanolicus MGA3]
TTGACTACAAAAATTGTGATAATTGATGATCACCAACTTTTTAGAGAAGGGGTAAAAAGAATATTAGATTTTGAAAAATC
ATTTGAAGTTGTGGCCGAGGGAGATGATGGAAAAGACGCCATTCATCTCGTTGAACAATATCATCCGGATGTTGTCATCA
TGGATATTAATATGCCTCATACAAATGGGATCGAGGCAACACAACAATTAATTGAGAAATATCCGGAATCACGCGTTATA
ATCTTATCGATTCACGATGATGAAAACTATGTAACCCATGCATTGAAAACAGGTGCGAGCGGCTACCTGCTGAAGGAAAT
GGATGCAGATGCACTCGTTGAAGCCGTTAAGGTTGTAGCTGAAGGCGGATCTTATATCCATCCGAAAGTTACCCACAATT
TAGTAAAAGAATATCGCAGGCTGGCAACCGAAACCGGAAACGGGGAATCTTATCCGCCCAACGGTGAAATCCGCCGCCCG
CTTCATTTATTGACCCGCCGCGAATGTGAAGTGCTTCAGCTGTTGGCAGACGGAAAAAGCAACCTCGGCTTCGGAGAAGC
ACTGTTCATCAGTGAAAAAACCGTGAAAAACCATGTCAGCAATATCCTGCAAAAAATGAATGTAAATGACCGTACCCAAG
CCGTTGTAGTAGCGATCAAAAACGGCTGGGTTGAGGTACGATAA
TTGACTACAAAAATTGTGATAATTGATGATCACCAACTTTTTAGAGAAGGGGTAAAAAGAATATTAGATTTTGAAAAATC
ATTTGAAGTTGTGGCCGAGGGAGATGATGGAAAAGACGCCATTCATCTCGTTGAACAATATCATCCGGATGTTGTCATCA
TGGATATTAATATGCCTCATACAAATGGGATCGAGGCAACACAACAATTAATTGAGAAATATCCGGAATCACGCGTTATA
ATCTTATCGATTCACGATGATGAAAACTATGTAACCCATGCATTGAAAACAGGTGCGAGCGGCTACCTGCTGAAGGAAAT
GGATGCAGATGCACTCGTTGAAGCCGTTAAGGTTGTAGCTGAAGGCGGATCTTATATCCATCCGAAAGTTACCCACAATT
TAGTAAAAGAATATCGCAGGCTGGCAACCGAAACCGGAAACGGGGAATCTTATCCGCCCAACGGTGAAATCCGCCGCCCG
CTTCATTTATTGACCCGCCGCGAATGTGAAGTGCTTCAGCTGTTGGCAGACGGAAAAAGCAACCTCGGCTTCGGAGAAGC
ACTGTTCATCAGTGAAAAAACCGTGAAAAACCATGTCAGCAATATCCTGCAAAAAATGAATGTAAATGACCGTACCCAAG
CCGTTGTAGTAGCGATCAAAAACGGCTGGGTTGAGGTACGATAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| degU | Bacillus subtilis subsp. subtilis str. 168 |
82.379 |
100 |
0.824 |
| vraR | Staphylococcus aureus N315 |
36.889 |
99.119 |
0.366 |