Detailed information NTG0122701

Bioinformatically predicted

Overview

• Name: ssbA
• Type: Machinery gene
• Locus tag: L2074_RS12995
• Genome accession: NZ_CP007689
• Coordinates: 2612963..2613445 (-)
• Length: 160 a.a.
• NCBI ID: WP_015967174.1
• Uniprot ID: A0AAN2WPY0
• Organism: Listeria monocytogenes strain L2074
• Function: ssDNA binding (predicted from homology) DNA processing

Genomic Context

Location: 2607963..2618445

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
L2074_RS12955 (L2074_02674)	-	2608159..2609478 (-)	1320	WP_033918288.1	PBSX family phage terminase large subunit	-
L2074_RS12960 (L2074_02675)	terS	2609471..2610211 (-)	741	WP_015987406.1	phage terminase small subunit	-
L2074_RS12965 (L2074_02676)	-	2610251..2610478 (-)	228	WP_012951944.1	hypothetical protein	-
L2074_RS12970 (L2074_02677)	-	2610559..2611191 (-)	633	WP_047933369.1	hypothetical protein	-
L2074_RS12975 (L2074_02679)	-	2611373..2611807 (-)	435	WP_015967178.1	ArpU family phage packaging/lysis transcriptional regulator	-
L2074_RS12980 (L2074_02680)	-	2611826..2611990 (-)	165	WP_015967177.1	hypothetical protein	-
L2074_RS12985 (L2074_02682)	-	2612119..2612523 (-)	405	WP_003769966.1	endodeoxyribonuclease	-
L2074_RS14905 (L2074_02683)	-	2612489..2612629 (-)	141	WP_014601286.1	BH0509 family protein	-
L2074_RS12990 (L2074_02684)	-	2612626..2612931 (-)	306	WP_015967175.1	hypothetical protein	-
L2074_RS12995 (L2074_02685)	ssbA	2612963..2613445 (-)	483	WP_015967174.1	single-stranded DNA-binding protein	Machinery gene
L2074_RS13000 (L2074_02686)	-	2613442..2613843 (-)	402	WP_015967173.1	hypothetical protein	-
L2074_RS13005 (L2074_02688)	-	2614287..2614685 (-)	399	WP_015967170.1	hypothetical protein	-
L2074_RS13010 (L2074_02689)	-	2614682..2614891 (-)	210	WP_047933379.1	hypothetical protein	-
L2074_RS13015 (L2074_02690)	-	2614994..2615584 (-)	591	WP_023552342.1	pentapeptide repeat-containing protein	-
L2074_RS13020 (L2074_02691)	-	2615581..2615790 (-)	210	WP_047933382.1	hypothetical protein	-
L2074_RS13025 (L2074_02692)	-	2615787..2616302 (-)	516	WP_047933386.1	hypothetical protein	-
L2074_RS13030 (L2074_02693)	-	2616406..2616624 (-)	219	WP_047933389.1	hypothetical protein	-
L2074_RS13035 (L2074_02694)	-	2616621..2617214 (-)	594	WP_047933392.1	DUF1642 domain-containing protein	-
L2074_RS13040 (L2074_02695)	-	2617211..2617420 (-)	210	WP_047933393.1	hypothetical protein	-
L2074_RS13045 (L2074_02696)	-	2617417..2617701 (-)	285	WP_047933395.1	hypothetical protein	-
L2074_RS14945 (L2074_02697)	-	2617717..2617884 (-)	168	WP_009931092.1	hypothetical protein	-

Sequence

Protein

• Length: 160 a.a.
• Molecular weight: 17839.68 Da
• Isoelectric Point: 4.9909

>NTDB_id=122701 L2074_RS12995 WP_015967174.1 2612963..2613445(-) (ssbA) [Listeria monocytogenes strain L2074]
MMNRVVLVGRLTKDPDLRYTPAGAAVATFTLAVNRMFTNQNGEREADFINCVVWRKPAENVANFLKKGSMAGVDGRVQTR
NYEDNDGKRVFVTEVVAESVQFLEPKNNNVEGATSNNYQNKANYSNNNQTSSYRADTSQKSDSFASEGKPIDINEDDLPF

Nucleotide

• Length: 483 bp

>NTDB_id=122701 L2074_RS12995 WP_015967174.1 2612963..2613445(-) (ssbA) [Listeria monocytogenes strain L2074]
ATGATGAATCGTGTAGTACTTGTAGGACGATTAACTAAAGACCCTGATTTACGTTACACTCCAGCCGGCGCGGCTGTTGC
GACTTTTACGCTAGCAGTAAATCGTATGTTCACTAATCAAAACGGAGAACGAGAAGCAGATTTCATTAATTGTGTTGTTT
GGCGCAAACCAGCAGAAAACGTTGCTAATTTCTTGAAGAAAGGAAGCATGGCGGGCGTTGATGGACGTGTTCAAACTCGT
AATTATGAGGATAACGACGGTAAACGTGTTTTCGTTACTGAGGTAGTTGCTGAATCAGTTCAATTCTTAGAACCTAAAAA
TAACAACGTAGAAGGTGCTACATCGAATAATTACCAAAACAAGGCTAATTATTCAAATAACAATCAAACAAGCTCATATC
GAGCGGATACGAGTCAGAAGAGCGATTCATTTGCAAGTGAAGGTAAGCCGATTGATATTAATGAAGATGATTTGCCATTT
TGA

Domains

Predicted by InterproScan.

• Single-strand binding protein family (SSB) (2-103)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
ssbA	Bacillus subtilis subsp. subtilis str. 168	65.116	100	0.7
ssb	Latilactobacillus sakei subsp. sakei 23K	55.882	100	0.594
ssbB	Bacillus subtilis subsp. subtilis str. 168	64.151	66.25	0.425