Detailed information    

insolico Bioinformatically predicted

Overview

Name   vicX   Type   Regulator
Locus tag   DK43_RS06540 Genome accession   NZ_CP007573
Coordinates   1351561..1352364 (-) Length   267 a.a.
NCBI ID   WP_021001533.1    Uniprot ID   A0AAP6BQW0
Organism   Streptococcus anginosus strain SA1     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 1346561..1357364
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  DK43_RS06525 (DK43_06705) smc 1346597..1350130 (-) 3534 WP_022525095.1 chromosome segregation protein SMC -
  DK43_RS06530 (DK43_06710) rnc 1350121..1350819 (-) 699 WP_003027666.1 ribonuclease III -
  DK43_RS06535 (DK43_06715) - 1351192..1351552 (-) 361 Protein_1302 DUF454 family protein -
  DK43_RS06540 (DK43_06720) vicX 1351561..1352364 (-) 804 WP_021001533.1 MBL fold metallo-hydrolase Regulator
  DK43_RS06545 (DK43_06725) micB 1352367..1353719 (-) 1353 WP_021001532.1 cell wall metabolism sensor histidine kinase VicK Regulator
  DK43_RS06550 (DK43_06730) micA 1353712..1354413 (-) 702 WP_003027677.1 response regulator YycF Regulator
  DK43_RS06555 (DK43_06735) - 1354698..1355039 (-) 342 WP_003027678.1 hypothetical protein -
  DK43_RS06560 (DK43_06740) - 1355066..1356379 (-) 1314 WP_022525097.1 glycosyltransferase family 4 protein -

Sequence

Protein


Download         Length: 267 a.a.        Molecular weight: 29854.82 Da        Isoelectric Point: 6.0342

>NTDB_id=121211 DK43_RS06540 WP_021001533.1 1351561..1352364(-) (vicX) [Streptococcus anginosus strain SA1]
MSEKGFKYSILASGSTGNCFYLETPKKKLLIDAGLSGKKITSLLSEIDRKPEDLDAILVTHEHKDHIHGVGVLARKYHLD
IYANQETWNAMEVALGKIDVSQKHIFEMGKTKTFGDIDIESFGVSHDAVAPQFYRLMKDDKSFVLLTDTGYVSDRMAGII
ENADGYLIESNHDIEILRSGAYPWSLKQRILSDQGHLSNDDGAETMIRTLGYRTKKIYLGHLSKENNTKELAHITMVNQL
AQADLAVEHDFHICDTSPDTATPLTNI

Nucleotide


Download         Length: 804 bp        

>NTDB_id=121211 DK43_RS06540 WP_021001533.1 1351561..1352364(-) (vicX) [Streptococcus anginosus strain SA1]
ATGAGCGAGAAAGGATTTAAGTATAGTATTTTAGCGTCAGGTTCTACCGGTAACTGTTTTTATTTAGAAACTCCAAAGAA
GAAGTTGTTGATTGATGCGGGCTTGTCTGGGAAGAAAATTACTAGCTTATTGAGTGAAATTGACCGTAAACCAGAGGATT
TGGATGCCATTTTGGTAACGCATGAGCATAAGGATCATATCCATGGTGTGGGCGTTTTGGCACGGAAATATCATTTAGAC
ATTTATGCCAATCAAGAAACATGGAATGCTATGGAAGTAGCGCTTGGGAAGATTGATGTTAGTCAGAAGCACATTTTTGA
AATGGGAAAAACCAAGACATTTGGCGATATTGACATTGAAAGTTTTGGTGTTAGTCATGATGCGGTTGCGCCGCAATTTT
ACCGACTAATGAAAGATGATAAAAGTTTTGTTCTACTGACGGATACTGGCTATGTTAGCGATCGTATGGCGGGGATTATT
GAAAATGCGGACGGGTATTTGATTGAGTCCAACCATGATATTGAAATCCTTCGTAGCGGAGCTTATCCTTGGAGCCTGAA
GCAGCGGATTTTATCTGACCAAGGACATTTGTCGAATGATGACGGGGCAGAAACCATGATTCGTACGTTGGGTTATCGCA
CTAAGAAAATCTATCTAGGTCATCTTAGCAAAGAAAACAATACCAAAGAATTGGCTCATATCACAATGGTCAATCAATTG
GCACAGGCTGATTTGGCGGTTGAGCATGATTTTCATATTTGTGATACATCGCCAGATACGGCGACACCTTTAACAAATAT
TTAG

Domains

Predicted by InterproScan.

Metallo-beta-lactamase superfamily (Lactamase_B)

(15-221)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vicX Streptococcus mutans UA159

81.648

100

0.816

Multiple sequence alignment