Detailed information NTG0120218

Bioinformatically predicted

Overview

• Name: comE
• Type: Machinery gene
• Locus tag: RR32_RS01750
• Genome accession: NZ_CP010368
• Coordinates: 380256..380732 (+)
• Length: 158 a.a.
• NCBI ID: WP_039246155.1
• Uniprot ID: -
• Organism: Acinetobacter nosocomialis strain 6411
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 375256..385732

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
RR32_RS01740 (RR32_01745)	-	375770..376552 (+)	783	WP_002051645.1	pilus assembly PilX family protein	-
RR32_RS01745 (RR32_01750)	-	376568..380242 (+)	3675	WP_039246152.1	PilC/PilY family type IV pilus protein	-
RR32_RS01750 (RR32_01755)	comE	380256..380732 (+)	477	WP_039246155.1	type IV pilin protein	Machinery gene
RR32_RS01755 (RR32_01760)	comF	380726..381190 (+)	465	WP_039246158.1	type IV pilin protein	Machinery gene
RR32_RS01760 (RR32_01765)	rpsP	381338..381589 (+)	252	WP_000260334.1	30S ribosomal protein S16	-
RR32_RS01765 (RR32_01770)	rimM	381609..382157 (+)	549	WP_039246162.1	ribosome maturation factor RimM	-
RR32_RS01770 (RR32_01775)	trmD	382204..382959 (+)	756	WP_006582565.1	tRNA (guanosine(37)-N1)-methyltransferase TrmD	-
RR32_RS01775 (RR32_01780)	rplS	383175..383543 (+)	369	WP_002051668.1	50S ribosomal protein L19	-
RR32_RS01780 (RR32_01785)	-	383595..384536 (-)	942	WP_080594638.1	lipase family alpha/beta hydrolase	-
RR32_RS01785 (RR32_01790)	-	384651..385685 (-)	1035	WP_039246173.1	lipase secretion chaperone	-

Sequence

Protein

• Length: 158 a.a.
• Molecular weight: 17207.73 Da
• Isoelectric Point: 9.8213

>NTDB_id=120218 RR32_RS01750 WP_039246155.1 380256..380732(+) (comE) [Acinetobacter nosocomialis strain 6411]
MKGKFTYSLGFTLIELMIVVVIVAIFAAVAIPSYQAYVLRADASRAQQQMQQIAVQLSRQKSRNFNYIGLSTGATTPVIL
PVGATGSAIKYRITVRDGDDTTKTLTDPTALGQNWVIRAEASDPNNFTYLFTSNGLRCKNKATSNVTYITCGTGAEPW

Nucleotide

• Length: 477 bp

>NTDB_id=120218 RR32_RS01750 WP_039246155.1 380256..380732(+) (comE) [Acinetobacter nosocomialis strain 6411]
ATGAAAGGTAAATTCACGTATTCTTTAGGCTTTACTCTTATTGAGCTAATGATCGTAGTCGTGATTGTTGCTATTTTTGC
TGCAGTTGCAATACCTTCATACCAAGCTTATGTTTTAAGAGCGGATGCTTCACGTGCGCAGCAACAAATGCAACAGATCG
CAGTGCAACTCTCACGTCAGAAATCTAGAAATTTTAATTACATAGGTTTATCTACAGGGGCTACAACCCCAGTAATTTTG
CCTGTTGGGGCAACTGGTAGTGCTATTAAATACCGAATAACTGTGCGTGATGGTGACGATACAACGAAAACCTTAACAGA
TCCTACAGCTTTAGGGCAAAACTGGGTGATTCGAGCAGAGGCTTCAGATCCTAATAATTTTACTTATTTGTTTACTAGTA
ACGGATTACGTTGCAAGAATAAAGCCACTAGCAATGTTACTTATATAACTTGTGGCACTGGAGCTGAGCCGTGGTAA

Domains

Predicted by InterProScan.

• Prokaryotic N-terminal methylation motif (N_methyl) (10-30)

• Type IV minor pilin ComP, DNA uptake sequence receptor (ComP_DUS) (32-106)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comE	Acinetobacter baylyi ADP1	44.785	100	0.462
pilY2	Acinetobacter baumannii D1279779	43.75	100	0.443