Detailed information    

insolico Bioinformatically predicted

Overview

Name   spo0A   Type   Regulator
Locus tag   CY96_RS19770 Genome accession   NZ_CP007512
Coordinates   3912859..3913653 (-) Length   264 a.a.
NCBI ID   WP_021727703.1    Uniprot ID   A0A9X3FF97
Organism   Bacillus bombysepticus str. Wang     
Function   activation and repression of comK; repression of rok; repression of abrB (predicted from homology)   
Competence regulation

Genomic Context

Location: 3907859..3918653
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  CY96_RS19745 (CY96_20020) - 3908277..3908858 (-) 582 WP_044584847.1 hypothetical protein -
  CY96_RS19750 (CY96_20025) - 3908922..3910013 (-) 1092 WP_044584848.1 hypothetical protein -
  CY96_RS19755 (CY96_20030) - 3910140..3910349 (-) 210 WP_044584849.1 hypothetical protein -
  CY96_RS19760 (CY96_20035) - 3910346..3911029 (-) 684 WP_044584850.1 hypothetical protein -
  CY96_RS19765 (CY96_20040) - 3911733..3912707 (-) 975 WP_044585105.1 tyrosine-type recombinase/integrase -
  CY96_RS19770 (CY96_20045) spo0A 3912859..3913653 (-) 795 WP_021727703.1 sporulation transcription factor Spo0A Regulator
  CY96_RS19780 (CY96_20050) spoIVB 3913944..3915242 (-) 1299 WP_002098091.1 SpoIVB peptidase -
  CY96_RS19785 (CY96_20055) recN 3915361..3917100 (-) 1740 WP_044584851.1 DNA repair protein RecN Machinery gene
  CY96_RS19790 (CY96_20060) argR 3917365..3917814 (-) 450 WP_001032580.1 arginine repressor ArgR -

Sequence

Protein


Download         Length: 264 a.a.        Molecular weight: 29445.20 Da        Isoelectric Point: 7.1175

>NTDB_id=120215 CY96_RS19770 WP_021727703.1 3912859..3913653(-) (spo0A) [Bacillus bombysepticus str. Wang]
MEKIKVCLVDDNKELVSMLESYVAAQDDMEVIGTAYNGQECLNLLTDKQPDVLVLDIIMPHLDGLAVLEKMRHIERLKQP
SVIMLTAFGQEDVTKKAVDLGASYFILKPFDMENLTSHIRQVSGKANTMIKRPLPSFRSATTVDGKPKNLDASITSIIHE
IGVPAHIKGYMYLREAISMVYNDIELLGSITKVLYPDIAKKYNTTASRVERAIRHAIEVAWSRGNIDSISSLFGYTVSMS
KAKPTNSEFIAMVADKLRLEHKAS

Nucleotide


Download         Length: 795 bp        

>NTDB_id=120215 CY96_RS19770 WP_021727703.1 3912859..3913653(-) (spo0A) [Bacillus bombysepticus str. Wang]
GTGGAGAAAATTAAAGTATGTCTTGTGGATGATAATAAAGAACTAGTATCAATGTTAGAGAGCTATGTAGCCGCTCAAGA
TGATATGGAAGTAATCGGTACTGCTTATAATGGTCAAGAGTGTTTAAACTTATTAACAGATAAGCAACCTGATGTACTCG
TTTTAGACATTATTATGCCACACTTAGATGGTTTAGCTGTATTGGAGAAAATGCGACATATTGAAAGGTTAAAACAGCCT
AGCGTAATTATGTTGACAGCATTTGGCCAAGAAGATGTGACGAAAAAAGCAGTTGACTTAGGTGCCTCATATTTCATATT
AAAACCATTTGATATGGAGAATTTAACGAGTCATATTCGTCAAGTGAGTGGTAAAGCAAACACTATGATTAAGCGTCCAC
TACCATCATTCCGATCAGCCACAACAGTAGATGGAAAACCGAAAAACTTAGATGCGAGTATTACGAGTATCATTCATGAA
ATTGGTGTACCCGCTCATATTAAAGGATATATGTATTTACGAGAAGCAATCTCCATGGTATACAATGATATTGAATTATT
AGGATCGATTACGAAAGTATTGTATCCAGATATCGCAAAGAAATATAATACAACAGCAAGCCGTGTGGAGCGCGCAATTC
GTCACGCAATTGAAGTAGCTTGGAGCCGTGGGAATATTGATTCTATTTCGTCCTTATTCGGTTATACAGTATCCATGTCA
AAAGCAAAACCTACGAATTCTGAGTTTATCGCAATGGTTGCGGATAAGCTGAGACTTGAACATAAAGCTTCGTAA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(6-119)

Sporulation initiation factor Spo0A C terminal (Spo0A_C)

(154-257)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0A Bacillus subtilis subsp. subtilis str. 168

80.899

100

0.818

Multiple sequence alignment