Detailed information
Bioinformatically predicted
Overview
| Name | pilV | Type | Machinery gene |
| Locus tag | RR32_RS01730 | Genome accession | NZ_CP010368 |
| Coordinates | 374234..374734 (+) | Length | 166 a.a. |
| NCBI ID | WP_080961310.1 | Uniprot ID | - |
| Organism | Acinetobacter nosocomialis strain 6411 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 369234..379734
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| RR32_RS01705 (RR32_01710) | - | 369252..371357 (-) | 2106 | WP_004711681.1 | RelA/SpoT family protein | - |
| RR32_RS19855 | - | 371396..371527 (-) | 132 | WP_102990545.1 | hypothetical protein | - |
| RR32_RS01710 (RR32_01715) | rpoZ | 371566..371844 (-) | 279 | WP_000135049.1 | DNA-directed RNA polymerase subunit omega | - |
| RR32_RS01715 (RR32_01720) | gmk | 371917..372546 (-) | 630 | WP_002051739.1 | guanylate kinase | - |
| RR32_RS01720 (RR32_01725) | ispH | 372669..373619 (+) | 951 | WP_002051768.1 | 4-hydroxy-3-methylbut-2-enyl diphosphate reductase | - |
| RR32_RS01725 (RR32_01730) | fimU | 373788..374237 (+) | 450 | WP_025467929.1 | GspH/FimT family pseudopilin | Machinery gene |
| RR32_RS01730 (RR32_01735) | pilV | 374234..374734 (+) | 501 | WP_080961310.1 | type IV pilus modification protein PilV | Machinery gene |
| RR32_RS01735 (RR32_01740) | pilW | 374736..375773 (+) | 1038 | WP_002051737.1 | PilW family protein | Machinery gene |
| RR32_RS01740 (RR32_01745) | - | 375770..376552 (+) | 783 | WP_002051645.1 | pilus assembly PilX family protein | - |
Sequence
Protein
Download Length: 166 a.a. Molecular weight: 18211.65 Da Isoelectric Point: 5.1026
>NTDB_id=120216 RR32_RS01730 WP_080961310.1 374234..374734(+) (pilV) [Acinetobacter nosocomialis strain 6411]
MKSLGHQRGMGMIEILVALLILAIGILGFIALQYRALEASAESTSRVQAITLARDLAERMRVNRNSLTIYNQQLQDASKQ
TDYAKNCFQNNCTDTELADFDVAQVVKSASSYGMTMNMIACPQTNNRQCIYIAWGDTSATNGPGVGDCTQNTSYNNNSTC
VIMEAY
MKSLGHQRGMGMIEILVALLILAIGILGFIALQYRALEASAESTSRVQAITLARDLAERMRVNRNSLTIYNQQLQDASKQ
TDYAKNCFQNNCTDTELADFDVAQVVKSASSYGMTMNMIACPQTNNRQCIYIAWGDTSATNGPGVGDCTQNTSYNNNSTC
VIMEAY
Nucleotide
Download Length: 501 bp
>NTDB_id=120216 RR32_RS01730 WP_080961310.1 374234..374734(+) (pilV) [Acinetobacter nosocomialis strain 6411]
ATGAAGAGCCTTGGACACCAGCGTGGTATGGGGATGATTGAAATTCTAGTTGCTTTGCTGATTTTGGCAATTGGTATTTT
AGGCTTTATTGCTCTGCAGTATAGAGCGTTAGAAGCAAGTGCAGAAAGTACATCACGGGTACAAGCAATTACATTAGCGC
GCGATCTTGCCGAGCGTATGAGAGTTAATCGTAATTCTTTAACTATATATAACCAGCAACTTCAAGATGCCAGTAAACAA
ACAGACTACGCTAAAAATTGCTTTCAAAACAATTGTACTGATACAGAGCTAGCTGATTTTGATGTTGCTCAGGTTGTAAA
AAGTGCATCTTCTTATGGTATGACTATGAATATGATTGCCTGTCCCCAAACTAACAATCGTCAATGTATTTATATTGCAT
GGGGAGATACTAGTGCAACGAATGGTCCTGGTGTAGGAGATTGTACTCAAAATACTTCATATAACAATAATTCAACATGT
GTGATTATGGAGGCCTATTAA
ATGAAGAGCCTTGGACACCAGCGTGGTATGGGGATGATTGAAATTCTAGTTGCTTTGCTGATTTTGGCAATTGGTATTTT
AGGCTTTATTGCTCTGCAGTATAGAGCGTTAGAAGCAAGTGCAGAAAGTACATCACGGGTACAAGCAATTACATTAGCGC
GCGATCTTGCCGAGCGTATGAGAGTTAATCGTAATTCTTTAACTATATATAACCAGCAACTTCAAGATGCCAGTAAACAA
ACAGACTACGCTAAAAATTGCTTTCAAAACAATTGTACTGATACAGAGCTAGCTGATTTTGATGTTGCTCAGGTTGTAAA
AAGTGCATCTTCTTATGGTATGACTATGAATATGATTGCCTGTCCCCAAACTAACAATCGTCAATGTATTTATATTGCAT
GGGGAGATACTAGTGCAACGAATGGTCCTGGTGTAGGAGATTGTACTCAAAATACTTCATATAACAATAATTCAACATGT
GTGATTATGGAGGCCTATTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilV | Acinetobacter baylyi ADP1 |
41.341 |
100 |
0.446 |
| pilV | Acinetobacter baumannii D1279779 |
41.477 |
100 |
0.44 |