Detailed information NTG0120170

Bioinformatically predicted

Overview

• Name: comA
• Type: Machinery gene
• Locus tag: CL52_RS07120
• Genome accession: NZ_CP007511
• Coordinates: 1551811..1554084 (+)
• Length: 757 a.a.
• NCBI ID: WP_235366402.1
• Uniprot ID: -
• Organism: Stutzerimonas balearica DSM 6083 strain DSM6083 (=SP1402)
• Function: ssDNA transport through the inner membrane (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1546811..1559084

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
CL52_RS07090 (CL52_07195)	-	1546976..1547281 (-)	306	WP_043219370.1	hypothetical protein	-
CL52_RS07095 (CL52_07200)	-	1547286..1547858 (-)	573	WP_043219373.1	PilZ domain-containing protein	-
CL52_RS07100 (CL52_07205)	-	1547953..1549200 (+)	1248	WP_043219374.1	lipoprotein-releasing ABC transporter permease subunit	-
CL52_RS07105 (CL52_07210)	lolD	1549193..1549903 (+)	711	WP_041106116.1	lipoprotein-releasing ABC transporter ATP-binding protein LolD	-
CL52_RS07110 (CL52_07215)	-	1549903..1551147 (+)	1245	WP_043222991.1	lipoprotein-releasing ABC transporter permease subunit	-
CL52_RS07115 (CL52_07220)	-	1551151..1551666 (-)	516	WP_043219377.1	DUF2062 domain-containing protein	-
CL52_RS07120 (CL52_07225)	comA	1551811..1554084 (+)	2274	WP_235366402.1	DNA internalization-related competence protein ComEC/Rec2	Machinery gene
CL52_RS07125 (CL52_07230)	-	1554113..1554745 (+)	633	WP_041106112.1	MotA/TolQ/ExbB proton channel family protein	-
CL52_RS07130 (CL52_07235)	-	1554742..1555170 (+)	429	WP_041106110.1	biopolymer transporter ExbD	-
CL52_RS07135 (CL52_07240)	lpxK	1555170..1556171 (+)	1002	WP_043219380.1	tetraacyldisaccharide 4'-kinase	-
CL52_RS07140 (CL52_07245)	-	1556218..1556403 (+)	186	WP_041106106.1	Trm112 family protein	-
CL52_RS07145 (CL52_07250)	kdsB	1556400..1557170 (+)	771	WP_041106105.1	3-deoxy-manno-octulosonate cytidylyltransferase	-
CL52_RS07150 (CL52_07255)	-	1557167..1557631 (+)	465	WP_043219384.1	low molecular weight protein-tyrosine-phosphatase	-
CL52_RS07155 (CL52_07260)	murB	1557628..1558647 (+)	1020	WP_043219387.1	UDP-N-acetylmuramate dehydrogenase	-

Sequence

Protein

• Length: 757 a.a.
• Molecular weight: 81944.74 Da
• Isoelectric Point: 9.9327

>NTDB_id=120170 CL52_RS07120 WP_235366402.1 1551811..1554084(+) (comA) [Stutzerimonas balearica DSM 6083 strain DSM6083 (=SP1402)]
MKARTGMAALAVGLLVPRWLPELPAGALLALLGATAVGAMCWKRTRPFACFALGLVWACWQAQLALDDRLPVDLDGRTFW
LEGVIVGLPATIDGVVRFELTDIQSRHAGLPSRLRLGWHGGPALRAGERWRLAARLKRPRAMVNPQTFDYEAWLLSRHIG
ATGTVKAGERVAASVTAAGWRDALRQRLAALDAHGRSGAIAALVVGDDSGLTPGDWQILQDTGTVHLLVISGQHVAMLAG
LLYGLVHLLYRLGCWPSRLPWLPVACGLAFGGALGYAWLAGFEVPVQRACVMVAAVLLWRLRYRHLGVWFPLLLALVLVL
LANPLVSLQPGFWLSFAAVALLVWVFAGRLGAAGWWRTLLRAQWAMTLGLLPMMLMLGLPVSFSGPLANLVAVPWVSLTV
PFALVGTAALYLPLGLGESLLNGVGWSLQGLFGLLAWVAGWQPAWLAPQASGWMLLAASLGALILLLPAGIPFRLFGGLL
MLPLLFVGSERPPPGRAEIHVLDVGQGLSVLVRTQGHDLLYDAGPRYGRFDIGERVVVPSLRRLGTRQLDLLLLSHADSD
HAGGAQAVLRSLPVRRMLSGEAQALDLPAVEDCRPGERWRWDEVRFETWRWLRAGDGNQASCVLAVEAAGERILLTGDLD
SAAEQALLGSRFNPRSDWLLLGHHGSRTSTSVAFLSAVAPSAALVSRSAHNPFGHPHSEVLHRLDEAGIPLYDTARDGAL
RIVLGSFTAPQGLRWERRFWRENENGSRRLAAGPVLE

Nucleotide

• Length: 2274 bp

>NTDB_id=120170 CL52_RS07120 WP_235366402.1 1551811..1554084(+) (comA) [Stutzerimonas balearica DSM 6083 strain DSM6083 (=SP1402)]
ATGAAGGCGCGCACAGGGATGGCTGCGCTGGCGGTGGGTTTGCTGGTGCCGCGCTGGCTGCCCGAGTTGCCGGCAGGCGC
TCTGTTGGCACTGCTGGGTGCAACGGCGGTTGGCGCGATGTGCTGGAAGCGCACGCGCCCCTTTGCGTGTTTCGCCTTGG
GCCTGGTATGGGCCTGTTGGCAGGCGCAGCTCGCCCTCGATGACCGACTCCCGGTCGATCTGGATGGCCGCACCTTCTGG
CTCGAGGGCGTGATCGTCGGCTTGCCTGCAACCATCGACGGGGTGGTTCGCTTCGAACTGACCGATATCCAGTCGCGCCA
TGCCGGCCTGCCGTCGCGCCTTCGCCTTGGCTGGCACGGCGGGCCTGCGCTTCGGGCCGGTGAGCGCTGGCGACTCGCGG
CACGTCTGAAACGGCCTCGCGCAATGGTCAATCCACAGACCTTCGACTATGAGGCCTGGCTGCTCTCAAGGCACATCGGC
GCGACAGGTACGGTAAAGGCTGGCGAGCGAGTCGCGGCCTCCGTCACGGCCGCCGGCTGGCGCGATGCGCTCAGGCAGCG
GCTGGCTGCGCTCGATGCCCATGGTCGCTCGGGTGCGATTGCGGCGCTGGTCGTCGGCGACGACTCCGGGCTCACGCCCG
GCGATTGGCAGATCCTGCAGGACACCGGCACGGTGCACTTACTGGTAATTTCCGGTCAGCATGTGGCGATGCTGGCTGGG
CTGCTCTATGGGCTGGTCCATTTGCTCTACCGTCTGGGCTGCTGGCCTTCGCGCCTGCCGTGGCTGCCGGTTGCATGCGG
TCTCGCTTTCGGCGGCGCCCTGGGCTATGCCTGGCTGGCGGGGTTCGAGGTGCCGGTACAGCGCGCCTGTGTAATGGTTG
CGGCAGTGCTGCTTTGGCGGCTGCGCTACCGGCATCTCGGCGTCTGGTTCCCCTTGCTGCTCGCGTTGGTCCTGGTGCTG
CTGGCCAACCCGCTGGTCAGCCTGCAGCCAGGGTTCTGGCTGTCGTTCGCTGCAGTCGCGTTGCTGGTGTGGGTCTTTGC
CGGCCGGCTCGGGGCTGCCGGCTGGTGGCGCACGCTCTTGCGTGCGCAGTGGGCAATGACGCTCGGCCTGCTACCGATGA
TGTTGATGCTCGGGCTTCCGGTCAGCTTCAGCGGGCCGCTTGCCAACCTCGTAGCGGTACCCTGGGTCAGCCTGACCGTT
CCGTTTGCCCTTGTGGGAACTGCCGCGCTTTATCTACCGCTGGGGCTCGGGGAGAGCCTGCTGAATGGGGTAGGTTGGTC
ATTGCAGGGCTTGTTCGGCTTGCTGGCCTGGGTCGCTGGCTGGCAGCCGGCCTGGCTCGCGCCGCAAGCCTCCGGCTGGA
TGCTGCTGGCCGCGAGCCTTGGGGCGCTGATTCTGCTGCTGCCGGCAGGCATTCCGTTCCGTCTGTTCGGCGGTCTCCTG
ATGCTGCCCTTGCTTTTCGTCGGCAGCGAACGGCCCCCTCCGGGACGTGCCGAGATCCATGTGCTGGATGTCGGTCAAGG
GCTGTCAGTCCTGGTCCGCACGCAGGGCCACGATCTGCTCTACGATGCCGGCCCCCGTTATGGTCGCTTCGATATCGGCG
AGCGCGTGGTGGTGCCTTCGTTACGTCGACTGGGGACCCGACAGCTTGATCTTTTGTTGCTCAGCCACGCCGACAGTGAC
CATGCTGGTGGCGCCCAGGCGGTACTTCGCTCTTTGCCGGTGCGCCGGATGCTAAGCGGTGAGGCGCAGGCATTGGACCT
TCCGGCTGTAGAGGACTGCCGGCCCGGCGAACGCTGGCGCTGGGATGAGGTGCGCTTCGAGACATGGCGCTGGCTGCGTG
CAGGCGACGGAAACCAGGCGTCCTGCGTGCTGGCGGTCGAGGCCGCCGGCGAACGGATTCTGCTGACGGGCGATCTGGAC
AGCGCCGCCGAGCAGGCCCTGCTCGGCAGCCGCTTTAACCCTCGAAGCGACTGGTTGCTGCTTGGACATCATGGCAGCCG
CACTTCGACTTCTGTCGCCTTTCTCTCGGCCGTTGCGCCAAGCGCGGCGTTGGTGTCGCGTAGCGCACACAACCCGTTCG
GGCACCCGCACTCCGAGGTGCTGCATCGTTTGGATGAGGCGGGCATACCGCTCTACGACACGGCTCGGGACGGCGCCTTG
CGCATAGTACTGGGCAGCTTCACTGCGCCCCAGGGTTTACGCTGGGAGCGTCGGTTCTGGCGGGAAAATGAGAACGGCAG
CCGTCGGCTGGCGGCAGGCCCTGTGCTAGAGTGA

Domains

Predicted by InterproScan.

• Domain of unknown function (DUF4131) (DUF4131) (25-170)

• Competence protein (Competence) (203-467)

• Metallo-beta-lactamase superfamily (Lactamase_B) (503-687)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comA	Pseudomonas stutzeri DSM 10701	66.761	92.999	0.621
comA	Ralstonia pseudosolanacearum GMI1000	36.601	100	0.37