Detailed information NTG0120139

Bioinformatically predicted

Overview

• Name: comA
• Type: Machinery gene
• Locus tag: UIB01_RS07720
• Genome accession: NZ_CP007509
• Coordinates: 1649700..1651925 (+)
• Length: 741 a.a.
• NCBI ID: WP_080695059.1
• Uniprot ID: -
• Organism: Stutzerimonas decontaminans strain 19SMN4
• Function: ssDNA transport through the inner membrane (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1644700..1656925

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
UIB01_RS07690 (UIB01_07815)	-	1644852..1645160 (-)	309	WP_038658487.1	hypothetical protein	-
UIB01_RS07695 (UIB01_07820)	-	1645164..1645799 (-)	636	WP_080695058.1	PilZ domain-containing protein	-
UIB01_RS07700 (UIB01_07825)	-	1645832..1647079 (+)	1248	WP_038658490.1	lipoprotein-releasing ABC transporter permease subunit	-
UIB01_RS07705 (UIB01_07830)	lolD	1647087..1647785 (+)	699	WP_038665516.1	lipoprotein-releasing ABC transporter ATP-binding protein LolD	-
UIB01_RS07710 (UIB01_07835)	-	1647785..1649029 (+)	1245	WP_038665519.1	lipoprotein-releasing ABC transporter permease subunit	-
UIB01_RS07715 (UIB01_07840)	-	1649036..1649551 (-)	516	WP_038658492.1	DUF2062 domain-containing protein	-
UIB01_RS07720 (UIB01_07845)	comA	1649700..1651925 (+)	2226	WP_080695059.1	DNA internalization-related competence protein ComEC/Rec2	Machinery gene
UIB01_RS07725 (UIB01_07850)	-	1651997..1652629 (+)	633	WP_038658496.1	MotA/TolQ/ExbB proton channel family protein	-
UIB01_RS07730 (UIB01_07855)	-	1652626..1653054 (+)	429	WP_015276529.1	biopolymer transporter ExbD	-
UIB01_RS07735 (UIB01_07860)	lpxK	1653054..1654058 (+)	1005	WP_038658499.1	tetraacyldisaccharide 4'-kinase	-
UIB01_RS07740 (UIB01_07865)	-	1654105..1654290 (+)	186	WP_003299639.1	Trm112 family protein	-
UIB01_RS07745 (UIB01_07870)	kdsB	1654287..1655051 (+)	765	WP_038658502.1	3-deoxy-manno-octulosonate cytidylyltransferase	-
UIB01_RS07750 (UIB01_07875)	-	1655053..1655517 (+)	465	WP_038665524.1	low molecular weight protein-tyrosine-phosphatase	-
UIB01_RS07755 (UIB01_07880)	murB	1655514..1656533 (+)	1020	WP_038658505.1	UDP-N-acetylmuramate dehydrogenase	-

Sequence

Protein

• Length: 741 a.a.
• Molecular weight: 80786.85 Da
• Isoelectric Point: 10.0015

>NTDB_id=120139 UIB01_RS07720 WP_080695059.1 1649700..1651925(+) (comA) [Stutzerimonas decontaminans strain 19SMN4]
MRIWMLAFAAGLVLPRFLPMLPGIWACVVFAMVGVLMLMCRRTVALGLFLLGLSWACYQGQNAVDDRLPASMDGRTFWIE
GRVVGLPGAVGDVVRFELVDIESRHVGLPSKVRLSWYGGPQLRAGERWRLAARLKRPRGLVNPQSFDYEAWLLARGIGAT
GSVKAGGRLSASAATDGWRDRLRARLMDVPAFDRQGAIAALVVGDDSGLSRSDWQVLQDTGTVHLMVISGQHIGMLAGLL
YGLVALLARLGIWPRQWPWLPWACGLALAGALFYGCLAGFDVPVRRACFMVAVVLLWRLRFRHLGVWQPLLFALNGVLLI
DPLVTLQPGFWLSFGAVAVLALVFAGRLGRWVWWKTLLRAQWAATLGLLPLLLALGLPVSASSPLANLIAVPWVSLTVPF
ALLGTALLPLGGVGEAILWLVGGSLALLFELLSFIAAWRPAWLAVGLPSWALLMIGMGALLLLMPTGIPPRALGLMLLLP
LVFPPVTAVPEGRAQVWLLDVGQGLSVLVRTREHALLYDAGPRQGDFDTGERVVFPSLRSLGVARLDKLLLSHADNDHSG
GAQAIQRLMPVAKIISGEPQRHAADLPAEPCESGLAWQWNDVRFSLWQWQAARDSNQTSCVLLIEANGERVLLTGDIDEA
AEQALVRSRQDVQAQWLLLPHHGSRSSSSESFLRAVGPTAALISRSLHNAFGHPHPSVSARLLALDINAYDTALHGAIRI
DLGDFSAAEVMRTQRRFWREK

Nucleotide

• Length: 2226 bp

>NTDB_id=120139 UIB01_RS07720 WP_080695059.1 1649700..1651925(+) (comA) [Stutzerimonas decontaminans strain 19SMN4]
ATGCGCATATGGATGCTGGCGTTCGCTGCCGGTCTTGTTCTGCCACGCTTTTTGCCGATGCTGCCAGGGATCTGGGCCTG
CGTAGTGTTTGCCATGGTCGGCGTGCTGATGCTCATGTGCAGGAGGACGGTCGCGCTAGGCTTGTTTCTCCTTGGCTTGA
GCTGGGCCTGTTATCAAGGCCAGAACGCCGTTGATGATCGCCTGCCGGCGTCGATGGATGGCCGTACCTTCTGGATCGAG
GGTCGGGTGGTCGGTCTGCCTGGTGCGGTAGGCGATGTGGTGCGCTTCGAGCTCGTCGATATCGAGTCGCGACATGTCGG
GTTGCCGTCGAAAGTACGATTGTCCTGGTATGGCGGACCGCAGCTGCGAGCCGGTGAGCGCTGGCGGCTGGCGGCACGAC
TGAAGCGTCCGCGTGGCCTGGTCAATCCACAATCGTTCGACTACGAAGCCTGGCTGCTGGCGCGTGGTATTGGCGCCACC
GGCAGCGTCAAGGCTGGGGGGCGTCTGTCGGCGTCGGCTGCCACCGACGGCTGGCGCGACCGGCTGCGGGCGCGCCTGAT
GGATGTTCCGGCGTTCGATCGGCAGGGCGCGATCGCCGCGCTGGTGGTGGGGGATGACTCAGGTTTGAGTCGCAGCGATT
GGCAGGTGCTGCAGGACACCGGCACCGTGCACCTGATGGTCATTTCCGGGCAGCACATCGGCATGCTGGCGGGGTTGCTG
TACGGGCTGGTCGCCTTGCTGGCCCGTTTGGGCATCTGGCCGAGGCAGTGGCCGTGGCTCCCTTGGGCGTGTGGGCTGGC
GCTTGCCGGCGCGCTTTTCTACGGCTGTCTCGCCGGGTTTGACGTTCCGGTCCGTCGTGCCTGCTTCATGGTTGCGGTGG
TATTGCTCTGGCGCTTGCGCTTTCGTCACCTGGGTGTATGGCAGCCGCTGCTGTTTGCGCTCAATGGCGTTCTGCTGATC
GATCCTCTGGTAACCCTGCAGCCGGGGTTTTGGCTCTCCTTCGGTGCGGTGGCGGTGCTCGCGCTGGTCTTCGCCGGCAG
ACTTGGGCGGTGGGTCTGGTGGAAGACGCTGCTACGGGCCCAATGGGCTGCCACCCTGGGCTTGCTTCCTTTGCTGCTGG
CGCTGGGGCTTCCGGTCAGCGCGAGCAGCCCGCTGGCCAACCTGATTGCCGTGCCCTGGGTAAGCTTGACGGTTCCTTTT
GCACTGCTTGGCACGGCGCTGCTGCCGCTAGGGGGCGTCGGCGAAGCCATATTGTGGTTGGTGGGCGGTTCGCTGGCACT
GCTGTTCGAGTTGCTGAGCTTCATCGCGGCATGGCGACCGGCGTGGTTGGCCGTCGGCTTGCCGTCTTGGGCGTTACTGA
TGATCGGCATGGGCGCTTTGCTGCTGCTGATGCCGACCGGCATTCCTCCGCGCGCGCTGGGGCTGATGTTGCTCTTACCC
TTGGTCTTCCCTCCTGTTACTGCGGTGCCGGAGGGGCGAGCGCAGGTGTGGCTGCTGGATGTGGGGCAGGGGTTGTCGGT
ACTGGTGCGCACCCGCGAGCATGCGTTGCTCTACGACGCCGGGCCGCGCCAAGGCGACTTCGATACGGGCGAGCGGGTCG
TCTTTCCTTCACTGCGAAGTTTGGGTGTGGCTCGGTTGGATAAGTTGCTGCTTAGTCATGCCGACAATGATCATTCTGGT
GGCGCCCAGGCAATCCAGCGCTTGATGCCGGTGGCGAAGATCATCAGTGGTGAGCCGCAACGACACGCAGCTGATCTGCC
GGCGGAGCCGTGCGAAAGTGGCTTGGCGTGGCAGTGGAACGATGTGCGCTTCAGTCTCTGGCAATGGCAGGCGGCCCGCG
ACAGCAATCAGACTTCATGCGTTTTGCTGATCGAGGCGAACGGTGAGCGCGTCCTGCTCACGGGCGATATTGATGAGGCA
GCGGAGCAGGCTTTAGTGCGTAGCAGGCAGGACGTGCAGGCGCAGTGGCTGCTGTTGCCGCATCACGGCAGTCGCAGCTC
CTCGTCAGAGTCTTTCCTGCGAGCGGTAGGGCCGACCGCTGCACTTATCTCCCGCAGCCTACACAACGCGTTCGGGCATC
CTCACCCAAGTGTGAGTGCGCGGCTCTTGGCTCTGGATATCAACGCCTACGACACCGCATTGCACGGCGCTATCCGGATC
GATCTAGGTGATTTTTCGGCGGCCGAGGTGATGCGGACGCAACGTCGATTCTGGCGGGAAAAATGA

Domains

Predicted by InterproScan.

• Competence protein (Competence) (201-464)

• Domain of unknown function (DUF4131) (DUF4131) (24-166)

• Metallo-beta-lactamase superfamily (Lactamase_B) (500-683)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comA	Pseudomonas stutzeri DSM 10701	66.337	95.412	0.633
comA	Ralstonia pseudosolanacearum GMI1000	35.612	100	0.401