Detailed information NTG0119897

Bioinformatically predicted

Overview

• Name: ruvA
• Type: Machinery gene
• Locus tag: RP72_RS14970
• Genome accession: NZ_CP010314
• Coordinates: 2815658..2816263 (-)
• Length: 201 a.a.
• NCBI ID: WP_003229717.1
• Uniprot ID: O05392
• Organism: Bacillus subtilis subsp. subtilis strain 3NA isolate 1970 (Michel and Millet)
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 2810658..2821263

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
RP72_RS14940 (RP72_14940)	-	2811471..2811860 (+)	390	WP_004398667.1	TIGR04086 family membrane protein	-
RP72_RS14945 (RP72_14945)	yajC	2811917..2812183 (-)	267	WP_004398708.1	preprotein translocase subunit YajC	-
RP72_RS14950 (RP72_14950)	tgt	2812220..2813365 (-)	1146	WP_003229725.1	tRNA guanosine(34) transglycosylase Tgt	-
RP72_RS14955 (RP72_14955)	queA	2813392..2814420 (-)	1029	WP_003229723.1	tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA	-
RP72_RS14960 (RP72_14960)	yrzS	2814450..2814650 (-)	201	WP_003222669.1	DUF2905 domain-containing protein	-
RP72_RS14965 (RP72_14965)	ruvB	2814643..2815647 (-)	1005	WP_003229718.1	Holliday junction branch migration DNA helicase RuvB	Machinery gene
RP72_RS14970 (RP72_14970)	ruvA	2815658..2816263 (-)	606	WP_003229717.1	Holliday junction branch migration protein RuvA	Machinery gene
RP72_RS14975 (RP72_14975)	bofC	2816402..2816914 (-)	513	WP_003229715.1	sporulation cell-cell signaling protein BofC	-
RP72_RS14980 (RP72_14980)	csbX	2816962..2818269 (-)	1308	WP_003246197.1	MFS transporter	-
RP72_RS14985 (RP72_14985)	iolG	2818340..2819365 (-)	1026	WP_004398990.1	inositol 2-dehydrogenase	-
RP72_RS14990 (RP72_14990)	yrzF	2819603..2820250 (+)	648	WP_003246159.1	phosphotransferase	-
RP72_RS23405 (RP72_14995)	-	2820296..2820418 (-)	123	WP_003229707.1	hypothetical protein	-
RP72_RS23410 (RP72_15000)	yrzH	2820503..2820793 (+)	291	WP_003246047.1	DUF5412 family protein	-
RP72_RS22880 (RP72_15005)	-	2820800..2820940 (+)	141	WP_004398683.1	hypothetical protein	-

Sequence

Protein

• Length: 201 a.a.
• Molecular weight: 22584.08 Da
• Isoelectric Point: 5.4072

>NTDB_id=119897 RP72_RS14970 WP_003229717.1 2815658..2816263(-) (ruvA) [Bacillus subtilis subsp. subtilis strain 3NA isolate 1970 (Michel and Millet)]
MIEFVKGTIDYVSPQYIVIENGGIGYQIFTPNPFIYKERSQETIFTYHHIREDAFSLYGFSTREEKALFTKLLNVTGIGP
KGALAILGSGDPGAVIQAIENEDEAFLVKFPGVGKKTARQIILDLKGKLADVVPEMIENLFNHEERLEKQTAETALEEAL
EALRVLGYAEKEIKKVLPHLKEEIGLTTDQYVKKALQKLLK

Nucleotide

• Length: 606 bp

>NTDB_id=119897 RP72_RS14970 WP_003229717.1 2815658..2816263(-) (ruvA) [Bacillus subtilis subsp. subtilis strain 3NA isolate 1970 (Michel and Millet)]
GTGATTGAATTTGTTAAAGGGACGATTGATTATGTATCTCCCCAATATATTGTCATAGAGAACGGCGGCATCGGCTATCA
GATTTTCACGCCGAATCCGTTTATATATAAGGAGAGAAGCCAAGAAACGATTTTTACATACCATCATATCAGAGAGGATG
CTTTTTCGCTTTATGGTTTTTCAACAAGAGAGGAGAAGGCGCTCTTTACAAAGCTGTTAAACGTGACCGGAATTGGCCCG
AAAGGAGCACTTGCCATCTTGGGCTCGGGTGATCCCGGAGCGGTCATCCAAGCAATTGAAAATGAAGATGAAGCTTTTTT
GGTCAAGTTTCCTGGAGTAGGAAAGAAAACCGCACGCCAGATTATTCTAGATTTAAAAGGAAAGCTGGCAGATGTTGTGC
CTGAAATGATTGAAAATCTGTTTAATCATGAAGAAAGGCTTGAAAAGCAAACAGCGGAAACGGCTCTTGAAGAAGCACTT
GAAGCCCTCAGGGTTCTCGGATATGCTGAAAAAGAAATCAAAAAGGTGCTTCCTCACCTTAAAGAAGAAATTGGGCTGAC
AACAGACCAATATGTGAAAAAAGCATTACAAAAACTATTAAAGTAA

Domains

Predicted by InterProScan.

• RuvA, C-terminal domain (RuvA_C) (155-199)

• RuvA N terminal domain (RuvA_N) (1-59)

• Helix-hairpin-helix domain (HHH_5) (69-126)

3D structure

• AlphaFold DB: O05392

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
ruvA	Bacillus subtilis subsp. subtilis str. 168	100	100	1
ruvA	Streptococcus pneumoniae TIGR4	39.806	100	0.408
ruvA	Streptococcus pneumoniae R6	39.806	100	0.408
ruvA	Streptococcus pneumoniae D39	39.806	100	0.408