Detailed information
Bioinformatically predicted
Overview
| Name | comB | Type | Machinery gene |
| Locus tag | NTHI723_RS06230 | Genome accession | NZ_CP007472 |
| Coordinates | 1259734..1260240 (+) | Length | 168 a.a. |
| NCBI ID | WP_011272049.1 | Uniprot ID | Q4QNA7 |
| Organism | Haemophilus influenzae strain 723 | ||
| Function | type IV pilus biogenesis and function (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 1254734..1265240
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| NTHI723_RS06210 (NTHI723_01247) | - | 1254827..1255156 (-) | 330 | WP_005629464.1 | YbaB/EbfC family nucleoid-associated protein | - |
| NTHI723_RS06215 (NTHI723_01248) | - | 1255325..1256170 (-) | 846 | WP_011272052.1 | 23S rRNA (adenine(2030)-N(6))-methyltransferase RlmJ | - |
| NTHI723_RS06220 (NTHI723_01249) | - | 1256243..1258837 (-) | 2595 | WP_044364772.1 | penicillin-binding protein 1A | - |
| NTHI723_RS06225 (NTHI723_01250) | comA | 1258936..1259733 (+) | 798 | WP_011272050.1 | pilus assembly protein PilM | Machinery gene |
| NTHI723_RS06230 (NTHI723_01251) | comB | 1259734..1260240 (+) | 507 | WP_011272049.1 | competence protein ComB | Machinery gene |
| NTHI723_RS06235 (NTHI723_01252) | comC | 1260237..1260758 (+) | 522 | WP_011272048.1 | competence protein ComC | Machinery gene |
| NTHI723_RS06240 (NTHI723_01253) | comD | 1260755..1261168 (+) | 414 | WP_011272047.1 | pilus assembly protein PilP | Machinery gene |
| NTHI723_RS06245 (NTHI723_01254) | comE | 1261178..1262515 (+) | 1338 | WP_011272046.1 | type IV pilus secretin PilQ | Machinery gene |
| NTHI723_RS06250 (NTHI723_01255) | - | 1262528..1263214 (+) | 687 | WP_011272045.1 | ComF family protein | - |
| NTHI723_RS06255 (NTHI723_01256) | nfuA | 1263290..1263886 (+) | 597 | WP_005649300.1 | Fe-S biogenesis protein NfuA | - |
| NTHI723_RS06260 (NTHI723_01257) | nudC | 1263953..1264747 (+) | 795 | WP_005686893.1 | NAD(+) diphosphatase | - |
Sequence
Protein
Download Length: 168 a.a. Molecular weight: 19697.54 Da Isoelectric Point: 7.4684
>NTDB_id=119774 NTHI723_RS06230 WP_011272049.1 1259734..1260240(+) (comB) [Haemophilus influenzae strain 723]
MSMNLLPWRTYQHQKRLRRLAFYIALFILLAINLMLAFSNLIEQQKQNLQAQQTSFEQLNQQLHKTTMQIDQLRSAVKVG
EVLTSIPNEQVKKSLQQLSELPFQQGELNKFKQDANNLSLEGNAQDQTEFELIHQFLKKHFPNVKLSQVQPEQDTLFFHF
DVEQGAEK
MSMNLLPWRTYQHQKRLRRLAFYIALFILLAINLMLAFSNLIEQQKQNLQAQQTSFEQLNQQLHKTTMQIDQLRSAVKVG
EVLTSIPNEQVKKSLQQLSELPFQQGELNKFKQDANNLSLEGNAQDQTEFELIHQFLKKHFPNVKLSQVQPEQDTLFFHF
DVEQGAEK
Nucleotide
Download Length: 507 bp
>NTDB_id=119774 NTHI723_RS06230 WP_011272049.1 1259734..1260240(+) (comB) [Haemophilus influenzae strain 723]
ATGTCGATGAATTTATTGCCTTGGCGTACTTATCAACATCAAAAGCGTTTACGTCGTTTAGCTTTTTATATCGCTTTATT
TATCTTGCTTGCTATTAATTTAATGTTGGCTTTTAGCAATTTGATTGAACAACAGAAACAAAATTTGCAAGCGCAGCAAA
CATCTTTTGAACAACTTAATCAGCAACTTCACAAAACTACCATGCAAATTGATCAGTTACGCAGTGCGGTGAAAGTTGGT
GAAGTTTTGACATCTATTCCCAACGAGCAAGTAAAAAAGAGTTTACAACAGCTAAGTGAATTACCTTTTCAACAAGGAGA
ACTGAATAAATTTAAACAAGATGCCAATAACTTAAGTTTGGAAGGTAACGCGCAAGATCAAACAGAATTTGAACTGATTC
ATCAATTTTTAAAGAAACATTTTCCCAATGTGAAATTAAGTCAGGTTCAACCTGAACAAGATACATTGTTTTTTCACTTT
GATGTGGAACAAGGGGCGGAAAAATGA
ATGTCGATGAATTTATTGCCTTGGCGTACTTATCAACATCAAAAGCGTTTACGTCGTTTAGCTTTTTATATCGCTTTATT
TATCTTGCTTGCTATTAATTTAATGTTGGCTTTTAGCAATTTGATTGAACAACAGAAACAAAATTTGCAAGCGCAGCAAA
CATCTTTTGAACAACTTAATCAGCAACTTCACAAAACTACCATGCAAATTGATCAGTTACGCAGTGCGGTGAAAGTTGGT
GAAGTTTTGACATCTATTCCCAACGAGCAAGTAAAAAAGAGTTTACAACAGCTAAGTGAATTACCTTTTCAACAAGGAGA
ACTGAATAAATTTAAACAAGATGCCAATAACTTAAGTTTGGAAGGTAACGCGCAAGATCAAACAGAATTTGAACTGATTC
ATCAATTTTTAAAGAAACATTTTCCCAATGTGAAATTAAGTCAGGTTCAACCTGAACAAGATACATTGTTTTTTCACTTT
GATGTGGAACAAGGGGCGGAAAAATGA
Domains
No domain identified.
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comB | Haemophilus influenzae 86-028NP |
100 |
100 |
1 |
| comB | Haemophilus influenzae Rd KW20 |
98.81 |
100 |
0.988 |