Detailed information
Bioinformatically predicted
Overview
| Name | comE1/comEA | Type | Machinery gene |
| Locus tag | NTHIC486_RS08790 | Genome accession | NZ_CP007471 |
| Coordinates | 1806014..1806361 (-) | Length | 115 a.a. |
| NCBI ID | WP_005655981.1 | Uniprot ID | A0A0H3PPJ5 |
| Organism | Haemophilus influenzae strain C486 | ||
| Function | dsDNA binding (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1801014..1811361
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| NTHIC486_RS08770 (NTHIC486_01757) | bioB | 1801403..1802404 (-) | 1002 | WP_005647862.1 | biotin synthase BioB | - |
| NTHIC486_RS08775 (NTHIC486_01758) | thiQ | 1802517..1803164 (-) | 648 | WP_005647864.1 | thiamine ABC transporter ATP-binding protein | - |
| NTHIC486_RS08780 (NTHIC486_01759) | thiP | 1803148..1804764 (-) | 1617 | WP_044345905.1 | thiamine/thiamine pyrophosphate ABC transporter permease | - |
| NTHIC486_RS08785 (NTHIC486_01760) | thiB | 1804769..1805767 (-) | 999 | WP_005665958.1 | thiamine ABC transporter substrate binding subunit | - |
| NTHIC486_RS08790 (NTHIC486_01761) | comE1/comEA | 1806014..1806361 (-) | 348 | WP_005655981.1 | helix-hairpin-helix domain-containing protein | Machinery gene |
| NTHIC486_RS08795 (NTHIC486_01762) | ispH | 1806530..1807474 (-) | 945 | WP_038440077.1 | 4-hydroxy-3-methylbut-2-enyl diphosphate reductase | - |
| NTHIC486_RS08800 (NTHIC486_01763) | lspA | 1807471..1807986 (-) | 516 | WP_005655980.1 | signal peptidase II | - |
| NTHIC486_RS08805 (NTHIC486_01764) | - | 1808056..1809615 (-) | 1560 | WP_044345907.1 | phosphoethanolamine transferase | - |
Sequence
Protein
Download Length: 115 a.a. Molecular weight: 12369.19 Da Isoelectric Point: 8.0085
>NTDB_id=119754 NTHIC486_RS08790 WP_005655981.1 1806014..1806361(-) (comE1/comEA) [Haemophilus influenzae strain C486]
MKLMKTLFTSIVLCGALVVSSSFAEEKATEQTAQSVVTTQAEAQVAPAVVSDKLNINTATASEIQKSLTGIGAKKAEAIV
QYREKHGNFTNAEQLLEVQGIGKATLEKNRDRIIF
MKLMKTLFTSIVLCGALVVSSSFAEEKATEQTAQSVVTTQAEAQVAPAVVSDKLNINTATASEIQKSLTGIGAKKAEAIV
QYREKHGNFTNAEQLLEVQGIGKATLEKNRDRIIF
Nucleotide
Download Length: 348 bp
>NTDB_id=119754 NTHIC486_RS08790 WP_005655981.1 1806014..1806361(-) (comE1/comEA) [Haemophilus influenzae strain C486]
ATGAAATTAATGAAAACATTATTCACTTCGATTGTATTGTGTGGTGCACTGGTTGTTTCTTCGTCTTTTGCTGAGGAAAA
AGCGACAGAACAAACCGCTCAATCTGTTGTAACAACTCAAGCTGAAGCTCAAGTAGCACCAGCCGTAGTGAGCGATAAAT
TGAATATCAACACAGCAACTGCCAGTGAAATTCAAAAATCCCTAACTGGCATTGGTGCGAAAAAAGCGGAAGCTATTGTG
CAATATCGTGAAAAACACGGTAATTTTACTAATGCAGAACAGCTTTTAGAAGTACAAGGAATTGGCAAAGCAACACTAGA
GAAAAATCGTGATCGTATAATCTTTTAA
ATGAAATTAATGAAAACATTATTCACTTCGATTGTATTGTGTGGTGCACTGGTTGTTTCTTCGTCTTTTGCTGAGGAAAA
AGCGACAGAACAAACCGCTCAATCTGTTGTAACAACTCAAGCTGAAGCTCAAGTAGCACCAGCCGTAGTGAGCGATAAAT
TGAATATCAACACAGCAACTGCCAGTGAAATTCAAAAATCCCTAACTGGCATTGGTGCGAAAAAAGCGGAAGCTATTGTG
CAATATCGTGAAAAACACGGTAATTTTACTAATGCAGAACAGCTTTTAGAAGTACAAGGAATTGGCAAAGCAACACTAGA
GAAAAATCGTGATCGTATAATCTTTTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comE1/comEA | Haemophilus influenzae Rd KW20 |
97.321 |
97.391 |
0.948 |
| comEA/comE1 | Glaesserella parasuis strain SC1401 |
58.261 |
100 |
0.583 |
| comEA | Vibrio campbellii strain DS40M4 |
39.286 |
97.391 |
0.383 |