Detailed information    

insolico Bioinformatically predicted

Overview

Name   ccpA   Type   Regulator
Locus tag   DYB47_RS03180 Genome accession   NZ_UHFV01000002
Coordinates   577067..578071 (+) Length   334 a.a.
NCBI ID   WP_003081473.1    Uniprot ID   G5JYJ9
Organism   Streptococcus macacae NCTC 11558     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 572067..583071
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  DYB47_RS03165 (NCTC11558_00637) cls 573146..574705 (+) 1560 WP_003081666.1 cardiolipin synthase -
  DYB47_RS03170 (NCTC11558_00638) - 574896..575522 (+) 627 WP_003079265.1 CDP-archaeol synthase -
  DYB47_RS03175 (NCTC11558_00640) - 575827..576903 (-) 1077 WP_003081065.1 M24 family metallopeptidase -
  DYB47_RS03180 (NCTC11558_00641) ccpA 577067..578071 (+) 1005 WP_003081473.1 catabolite control protein A Regulator
  DYB47_RS03185 (NCTC11558_00642) - 578128..579597 (+) 1470 WP_003078577.1 alpha-amylase -
  DYB47_RS03190 (NCTC11558_00643) - 579664..580662 (+) 999 WP_003078515.1 glycosyltransferase family 4 protein -
  DYB47_RS03195 (NCTC11558_00644) - 580664..581998 (+) 1335 WP_003079111.1 glycosyltransferase family 4 protein -

Sequence

Protein


Download         Length: 334 a.a.        Molecular weight: 36969.12 Da        Isoelectric Point: 6.1601

>NTDB_id=1171308 DYB47_RS03180 WP_003081473.1 577067..578071(+) (ccpA) [Streptococcus macacae NCTC 11558]
MNTDDTITIYDVAREAGVSMATVSRVVNGNKNVKENTRKKVLEVIERLDYRPNAVARGLASKKTTTVGVVIPNIANAYFS
ILAKGIDDIATMYKYNIVLASSDEDDDREINVINTLFAKQVDGIIFMGHHLTEKIRAEFSRARTPIVLAGTVDLDHQLPS
VNIDYSKATQDAVDILARNNSKIAFVSGPLIDAINGKVRLNGYKNSLKNNNLPFKEGLVFEAQYKYQEGYNLAQRVMNSG
ATAAYVTEDELAAGLLNGLFEAGKKIPEDFEIITSNDSTIALYTRPNMTSISQPIYDLGAVAMRMLTKIMNKEELDEKEI
ILNHNIKDRGTTKP

Nucleotide


Download         Length: 1005 bp        

>NTDB_id=1171308 DYB47_RS03180 WP_003081473.1 577067..578071(+) (ccpA) [Streptococcus macacae NCTC 11558]
ATGAATACAGATGACACGATTACGATATATGATGTTGCCCGTGAAGCAGGTGTGTCTATGGCGACTGTCAGCCGTGTTGT
AAATGGAAATAAAAATGTCAAAGAAAATACTCGCAAAAAGGTTTTAGAAGTCATTGAGCGCCTTGATTACAGACCAAATG
CTGTAGCGCGCGGTCTCGCCAGCAAAAAAACGACAACAGTCGGTGTTGTCATTCCCAACATTGCCAATGCTTATTTCTCC
ATCTTAGCTAAAGGAATTGATGATATTGCAACAATGTACAAATATAATATCGTTTTAGCATCCAGCGATGAAGATGACGA
CAGAGAAATCAATGTCATTAATACCTTGTTTGCAAAACAGGTGGATGGTATTATATTTATGGGGCATCATTTAACAGAGA
AAATCCGAGCAGAGTTTTCTCGGGCACGTACCCCGATTGTTTTAGCAGGGACGGTAGATCTGGATCACCAGCTGCCCAGT
GTTAACATTGATTACAGTAAGGCAACGCAAGATGCTGTTGATATTTTGGCAAGGAATAACAGCAAAATTGCCTTTGTATC
AGGACCGTTAATAGATGCCATCAATGGTAAAGTGCGTTTGAACGGTTATAAAAACAGTTTGAAAAATAATAATTTGCCCT
TTAAAGAAGGCCTTGTTTTTGAAGCACAGTATAAATATCAAGAAGGCTATAATCTTGCCCAGCGTGTGATGAATTCAGGT
GCGACGGCAGCTTATGTCACAGAAGATGAATTGGCAGCAGGTCTTTTAAATGGTTTATTTGAGGCAGGTAAAAAAATTCC
CGAAGACTTTGAAATTATTACCAGCAATGATTCAACGATTGCCCTTTACACACGTCCTAATATGACCTCTATCAGCCAGC
CTATTTATGATTTAGGAGCTGTTGCTATGCGCATGCTGACAAAAATCATGAATAAGGAAGAATTGGATGAAAAAGAAATT
ATTTTGAATCATAATATTAAAGACAGGGGAACAACAAAACCATAG

Domains

Predicted by InterproScan.

Periplasmic binding protein-like domain (Peripla_BP_3)

(182-332)

Bacterial regulatory proteins, lacI family (LacI)

(8-53)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB G5JYJ9

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ccpA Streptococcus gordonii str. Challis substr. CH1

76.577

99.701

0.763
  ccpA Streptococcus pneumoniae D39

73.574

99.701

0.734
  ccpA Lactococcus lactis subsp. lactis strain DGCC12653

54.985

99.102

0.545

Multiple sequence alignment