Detailed information    

insolico Bioinformatically predicted

Overview

Name   pptA   Type   Regulator
Locus tag   DYB47_RS02050 Genome accession   NZ_UHFV01000002
Coordinates   364796..365524 (+) Length   242 a.a.
NCBI ID   WP_003081097.1    Uniprot ID   G5JXY7
Organism   Streptococcus macacae NCTC 11558     
Function   export ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 359796..370524
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  DYB47_RS02020 (NCTC11558_00411) - 359868..361298 (+) 1431 WP_003081251.1 NCS2 family permease -
  DYB47_RS02025 (NCTC11558_00412) tsaE 361575..362018 (+) 444 WP_040841683.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE -
  DYB47_RS02030 (NCTC11558_00413) - 362011..362535 (+) 525 WP_003080287.1 GNAT family N-acetyltransferase -
  DYB47_RS02035 (NCTC11558_00414) brpA 362547..363764 (+) 1218 WP_003082433.1 biofilm formation/cell division transcriptional regulator BrpA -
  DYB47_RS02040 (NCTC11558_00415) - 364019..364309 (-) 291 WP_003080825.1 hypothetical protein -
  DYB47_RS02045 (NCTC11558_00416) - 364306..364725 (-) 420 WP_003079344.1 HIT family protein -
  DYB47_RS02050 (NCTC11558_00417) pptA 364796..365524 (+) 729 WP_003081097.1 ABC transporter ATP-binding protein Regulator
  DYB47_RS02055 (NCTC11558_00418) pptB 365524..366567 (+) 1044 WP_003081862.1 ABC transporter permease Regulator
  DYB47_RS02060 (NCTC11558_00419) ccrZ 366615..367397 (+) 783 WP_003079525.1 cell cycle regulator CcrZ -
  DYB47_RS02065 (NCTC11558_00420) trmB 367407..368042 (+) 636 WP_003081415.1 tRNA (guanosine(46)-N7)-methyltransferase TrmB -
  DYB47_RS02075 (NCTC11558_00422) rimP 368513..369004 (+) 492 WP_003078952.1 ribosome maturation factor RimP -
  DYB47_RS02080 (NCTC11558_00423) nusA 369040..370248 (+) 1209 WP_003080887.1 transcription termination factor NusA -

Sequence

Protein


Download         Length: 242 a.a.        Molecular weight: 26838.15 Da        Isoelectric Point: 4.7979

>NTDB_id=1171301 DYB47_RS02050 WP_003081097.1 364796..365524(+) (pptA) [Streptococcus macacae NCTC 11558]
MLKIENLTGGYVNIPVLKNISFEVADGELLGLIGLNGAGKSTTINEIIGLLTPYAGKISIDGLTLLESGADYRKKIGFIP
ETPSLYEELTLREHIETVAMAYDIEVALVLERAQSLLKLFRLEDKLDWFPSHFSKGMKQKVMIICAFAVDPSLFIVDEPF
LGLDPVAIADLTELLANEKAKGKSILMSTHVLDSAEKMCDRFVILHHGQIRAQGTLAELRTHFGDEQASLSDIYMHLTKE
EY

Nucleotide


Download         Length: 729 bp        

>NTDB_id=1171301 DYB47_RS02050 WP_003081097.1 364796..365524(+) (pptA) [Streptococcus macacae NCTC 11558]
ATGTTAAAAATAGAAAATCTAACAGGCGGATATGTAAATATCCCTGTTTTAAAAAATATAAGTTTTGAAGTTGCTGATGG
TGAATTGCTGGGCTTAATTGGATTAAATGGTGCAGGTAAATCAACGACCATTAATGAAATTATCGGGCTTTTAACGCCTT
ATGCTGGGAAGATCAGCATTGATGGCCTAACTCTTTTGGAAAGTGGTGCGGATTATCGGAAAAAAATTGGTTTTATCCCT
GAAACACCTAGTTTATATGAAGAGTTAACTTTGAGAGAGCATATCGAAACTGTTGCCATGGCTTATGATATTGAAGTGGC
ATTAGTTTTAGAACGTGCACAGTCCTTACTTAAGCTTTTTCGTTTAGAGGATAAACTGGATTGGTTCCCTAGTCATTTTT
CTAAAGGGATGAAACAAAAAGTCATGATAATCTGCGCCTTTGCTGTTGATCCCAGTCTTTTTATTGTAGATGAACCCTTC
CTTGGTTTAGATCCTGTTGCTATCGCGGATCTTACAGAACTTCTGGCAAACGAAAAAGCTAAAGGTAAGTCTATTTTGAT
GTCTACGCACGTTTTGGATTCTGCAGAAAAAATGTGTGATCGTTTTGTTATTTTACATCATGGCCAAATAAGAGCCCAAG
GGACCCTTGCTGAGCTGCGGACTCATTTTGGGGATGAACAGGCCAGTCTTAGCGATATTTATATGCATCTGACTAAAGAG
GAATACTAA

Domains

Predicted by InterproScan.

ABC transporter (ABC_tran)

(17-160)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB G5JXY7

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pptA Streptococcus salivarius strain HSISS4

78.008

99.587

0.777
  pptA Streptococcus thermophilus LMD-9

78.008

99.587

0.777

Multiple sequence alignment