Detailed information NTG1171031

Bioinformatically predicted

Overview

• Name: pilR
• Type: Regulator
• Locus tag: ACOOFO_RS03190
• Genome accession: NZ_OZ244162
• Coordinates: 696256..697659 (-)
• Length: 467 a.a.
• NCBI ID: WP_420428217.1
• Uniprot ID: -
• Organism: MAG: Algiphilus sp. isolate dd919ab0-ff71-4ff6-8152-ac5c3678e526
• Function: regulate pilin expression (predicted from homology) Competence regulation

Genomic Context

Location: 691256..702659

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACOOFO_RS03170	-	692584..693669 (+)	1086	WP_420428213.1	PhoH family protein	-
ACOOFO_RS03175	ybeY	693666..694094 (+)	429	WP_420428214.1	rRNA maturation RNase YbeY	-
ACOOFO_RS03180	-	694134..695000 (+)	867	WP_420428215.1	HlyC/CorC family transporter	-
ACOOFO_RS03185	-	694997..696247 (+)	1251	WP_420428216.1	DUF4105 domain-containing protein	-
ACOOFO_RS03190	pilR	696256..697659 (-)	1404	WP_420428217.1	sigma-54-dependent transcriptional regulator	Regulator
ACOOFO_RS03195	-	697656..699227 (-)	1572	WP_420428218.1	sensor histidine kinase	-
ACOOFO_RS03200	sucC	699537..700703 (+)	1167	WP_420428219.1	ADP-forming succinate--CoA ligase subunit beta	-
ACOOFO_RS03205	sucD	700707..701582 (+)	876	WP_420428220.1	succinate--CoA ligase subunit alpha	-

Sequence

Protein

• Length: 467 a.a.
• Molecular weight: 51027.03 Da
• Isoelectric Point: 5.5090

>NTDB_id=1171031 ACOOFO_RS03190 WP_420428217.1 696256..697659(-) (pilR) [MAG: Algiphilus sp. isolate dd919ab0-ff71-4ff6-8152-ac5c3678e526]
MSRARVLVVDDEQDIRDLLGVALTRMGLEAVPAETVDQARRLLGQHNFRLCLTDMRLPDGNGIQLVETIQQHHPGLPVAV
ITAYGNAQAAVDSLKAGAFDFVSKPLQLDDLRRLVDDALKLPGAGSPEASDDGDCLIGDAPVMQQLRGLIGRVARSQAPL
HISGESGTGKERVARLVHQRSARKDGPFVPVNCGAIPSELMESELFGHIKGAFTGALQDNEGLFRAAEGGTLFLDEVAEL
PLPMQVKLLRAIQERVVRPVGARDEQPVNVRIISATNLDLAQCVSDGRFRQDLYYRLNVVGVRTPPLRQHPEDIPQLADY
ILEQIAHRHQRSEVPLLSECALRRLVAHPFPGNVRELENILERAVTLCEDSTITEEALQLEAVEAAGGGVPTSASPAPAT
SQPPAAQPTTESTTEHGDSLESRLQSVERQAIIEALEATRWNRTRAAEKLGLTFRQLRYKIRKLGIE

Nucleotide

• Length: 1404 bp

>NTDB_id=1171031 ACOOFO_RS03190 WP_420428217.1 696256..697659(-) (pilR) [MAG: Algiphilus sp. isolate dd919ab0-ff71-4ff6-8152-ac5c3678e526]
ATGAGTCGCGCCCGCGTCCTGGTGGTGGACGACGAGCAGGACATCCGCGATCTGCTCGGCGTTGCACTGACACGCATGGG
CCTCGAAGCGGTCCCCGCGGAAACCGTTGATCAGGCCCGGCGCCTGCTCGGTCAACACAATTTCCGCCTCTGTCTGACCG
ACATGCGGCTGCCCGATGGCAACGGCATCCAGCTGGTGGAAACCATCCAGCAACACCATCCGGGCTTGCCAGTGGCCGTC
ATCACCGCCTACGGCAACGCCCAGGCCGCAGTCGACAGCCTCAAGGCAGGCGCCTTCGATTTCGTCAGCAAGCCACTGCA
ACTAGACGATCTGCGTCGCCTGGTCGATGACGCCCTCAAGCTGCCCGGTGCGGGCAGCCCCGAGGCCAGCGACGACGGCG
ATTGCCTGATCGGGGATGCACCGGTCATGCAGCAGCTGCGCGGCCTCATCGGCCGCGTCGCGCGCAGTCAGGCGCCCTTG
CACATCAGTGGCGAGTCCGGGACCGGCAAGGAGCGCGTCGCGCGCCTGGTCCACCAGCGCAGCGCGCGCAAGGATGGCCC
CTTTGTACCGGTCAACTGCGGCGCCATTCCCTCGGAGCTGATGGAAAGCGAGCTCTTCGGCCATATCAAGGGGGCCTTTA
CCGGTGCCTTGCAGGACAACGAAGGGCTGTTTCGCGCCGCCGAGGGGGGCACCCTGTTTCTGGACGAGGTGGCGGAGCTA
CCGCTACCCATGCAGGTGAAACTGCTGCGCGCCATCCAGGAGCGCGTAGTCCGTCCGGTCGGTGCACGCGACGAGCAGCC
GGTCAACGTGCGCATCATCTCGGCCACCAATCTCGATCTTGCCCAGTGCGTCAGCGACGGACGTTTCCGGCAGGATCTCT
ACTACCGGCTCAATGTCGTGGGCGTGCGCACGCCGCCCTTGCGGCAGCACCCGGAAGATATCCCGCAGCTGGCCGACTAC
ATCCTCGAGCAGATCGCGCACCGGCATCAGCGCAGCGAGGTGCCTCTGCTGTCCGAATGCGCGTTGCGCCGGCTGGTGGC
GCACCCGTTTCCGGGCAATGTCCGCGAACTCGAGAACATCCTGGAACGCGCCGTCACCTTGTGCGAAGACAGCACCATCA
CCGAGGAGGCGCTGCAACTCGAAGCGGTCGAAGCCGCCGGGGGAGGCGTGCCGACCTCGGCCAGCCCAGCGCCTGCCACC
TCGCAACCGCCCGCAGCCCAGCCAACGACTGAAAGCACCACAGAACACGGGGACAGCCTCGAATCGCGGCTGCAGAGCGT
GGAGCGCCAAGCCATCATCGAGGCACTGGAGGCCACCCGCTGGAACCGCACCCGTGCCGCCGAGAAGCTCGGTCTCACTT
TCCGCCAGCTGCGCTACAAGATCCGCAAGCTCGGCATCGAGTAG

Domains

Predicted by InterproScan.

• Bacterial regulatory protein, Fis family (HTH_8) (425-464)

• Response regulator receiver domain (Response_reg) (6-115)

• Sigma-54 interaction domain (Sigma54_activat) (136-302)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilR	Pseudomonas aeruginosa PAK	55.889	100	0.559
pilR	Acinetobacter baumannii strain A118	47.639	99.786	0.475