Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   ACOFKY_RS20395 Genome accession   NZ_OZ241355
Coordinates   4368337..4368720 (+) Length   127 a.a.
NCBI ID   WP_004723803.1    Uniprot ID   A0A077L426
Organism   MAG: Acinetobacter sp. isolate 91b77bb6-a760-4576-a270-dd86adb6cd71     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 4363337..4373720
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACOFKY_RS20380 - 4364431..4365378 (+) 948 WP_336954661.1 DUF6160 family protein -
  ACOFKY_RS20385 - 4365448..4367163 (-) 1716 WP_419820020.1 proline--tRNA ligase -
  ACOFKY_RS20390 - 4367411..4368052 (-) 642 WP_336954658.1 hypothetical protein -
  ACOFKY_RS20395 pilG 4368337..4368720 (+) 384 WP_004723803.1 twitching motility response regulator PilG Regulator
  ACOFKY_RS20400 - 4368741..4369109 (+) 369 WP_336954657.1 response regulator -
  ACOFKY_RS20405 - 4369113..4369649 (+) 537 WP_336954656.1 chemotaxis protein CheW -
  ACOFKY_RS20410 - 4369693..4371762 (+) 2070 WP_336954655.1 methyl-accepting chemotaxis protein -

Sequence

Protein


Download         Length: 127 a.a.        Molecular weight: 14227.30 Da        Isoelectric Point: 4.7172

>NTDB_id=1170805 ACOFKY_RS20395 WP_004723803.1 4368337..4368720(+) (pilG) [MAG: Acinetobacter sp. isolate 91b77bb6-a760-4576-a270-dd86adb6cd71]
MDDKFQNLKVMVIDDSKTIRRTAETLLQREGCEVVTAVDGFEALSKIAEANPDIVFVDIMMPRLDGYQTCALIKNSQNYQ
NIPVIMLSSKDGLFDQAKGRVVGSDEYLTKPFSKDELLNAIRNHVTA

Nucleotide


Download         Length: 384 bp        

>NTDB_id=1170805 ACOFKY_RS20395 WP_004723803.1 4368337..4368720(+) (pilG) [MAG: Acinetobacter sp. isolate 91b77bb6-a760-4576-a270-dd86adb6cd71]
ATGGACGATAAATTTCAAAATTTAAAAGTCATGGTGATCGATGATTCTAAAACTATTCGTCGTACTGCTGAAACATTATT
ACAAAGAGAAGGTTGTGAGGTTGTCACTGCTGTAGACGGTTTTGAAGCTTTATCTAAAATTGCTGAAGCAAATCCAGATA
TTGTTTTTGTCGATATCATGATGCCTCGTCTTGATGGCTATCAAACCTGCGCTTTGATTAAAAACTCTCAAAATTATCAA
AATATTCCAGTCATCATGTTATCAAGTAAAGATGGCCTGTTTGATCAAGCAAAAGGTCGTGTTGTCGGTTCGGACGAATA
TTTAACAAAACCATTTAGTAAAGATGAACTATTAAATGCTATTCGCAATCATGTAACTGCTTAA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(10-122)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A077L426

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

96.063

100

0.961
  vicR Streptococcus mutans UA159

41.88

92.126

0.386
  pilH Synechocystis sp. PCC 6803

41.593

88.976

0.37

Multiple sequence alignment