Detailed information NTG1170786

Bioinformatically predicted

Overview

• Name: pilR
• Type: Regulator
• Locus tag: ACOFKY_RS14885
• Genome accession: NZ_OZ241355
• Coordinates: 3219172..3220587 (+)
• Length: 471 a.a.
• NCBI ID: WP_419819696.1
• Uniprot ID: -
• Organism: MAG: Acinetobacter sp. isolate 91b77bb6-a760-4576-a270-dd86adb6cd71
• Function: regulation of type IV pilus assembly (predicted from homology) Competence regulation

Genomic Context

Location: 3214172..3225587

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACOFKY_RS14870	pbpG	3215627..3216682 (-)	1056	WP_004718389.1	D-alanyl-D-alanine endopeptidase PBP7/8	-
ACOFKY_RS14875	-	3216915..3217550 (+)	636	WP_336952334.1	response regulator	-
ACOFKY_RS14880	pilS	3217586..3219154 (+)	1569	WP_336952335.1	sensor histidine kinase	Regulator
ACOFKY_RS14885	pilR	3219172..3220587 (+)	1416	WP_419819696.1	sigma-54-dependent transcriptional regulator	Regulator
ACOFKY_RS14890	-	3220873..3222051 (-)	1179	WP_336952337.1	S41 family peptidase	-
ACOFKY_RS14895	gpmI	3222082..3223629 (-)	1548	WP_336952339.1	2,3-bisphosphoglycerate-independent phosphoglycerate mutase	-
ACOFKY_RS14900	lptG	3223784..3224854 (-)	1071	WP_419819697.1	LPS export ABC transporter permease LptG	-

Sequence

Protein

• Length: 471 a.a.
• Molecular weight: 53255.26 Da
• Isoelectric Point: 6.4050

>NTDB_id=1170786 ACOFKY_RS14885 WP_419819696.1 3219172..3220587(+) (pilR) [MAG: Acinetobacter sp. isolate 91b77bb6-a760-4576-a270-dd86adb6cd71]
MTTRQPLVLLVDDEQDLCMLMQMSLSRMGIKTHMAHHLQQAKYFFSEYKYDACITDLNLPDGSGLDLVKHVSQHYPKTPI
AVLTAYGNMEIAIASLKAGAFDFVSKPINQLHLQQLLQKALHVPQLRETISDAPLEESMLIGDSQVIRKLRESIKKIARS
QAPVFITGESGTGKEVVANLIHLLSNRSDSPFVAINCGAISEDLMESELFGHKKGCFSGATQDKQGLIQAANGGTLFLDE
IAELSLAMQAKLLRALQEKKIRPLGSDTEIEVDFRIISATHQDIEAFVEQGKFRHDLFFRIHVMDIVLPPLRERDCDILI
LANHFLQQICTEWRISTKSFTEQAKAFLLQQHYSGNVRELRNIIEKAITMSDEDYIDIQQLQPAPHRGINKVESRDPIQS
QVLPIVTANKAQNIPEEGLEQYLEKVEKEVLLSALNQTHWNRTLAAKKLGMTFRSLRYRLKKFGLDTDDDE

Nucleotide

• Length: 1416 bp

>NTDB_id=1170786 ACOFKY_RS14885 WP_419819696.1 3219172..3220587(+) (pilR) [MAG: Acinetobacter sp. isolate 91b77bb6-a760-4576-a270-dd86adb6cd71]
ATGACTACACGACAACCATTGGTTTTACTTGTAGATGATGAACAAGATTTATGTATGTTAATGCAAATGAGCCTTTCTCG
AATGGGCATCAAAACGCATATGGCACACCATTTACAACAAGCCAAATATTTTTTTAGTGAATATAAATATGATGCCTGTA
TTACCGATTTAAACCTCCCTGATGGCAGTGGTTTAGATTTGGTTAAACATGTATCGCAGCATTATCCTAAAACGCCTATT
GCAGTCTTAACTGCATATGGAAATATGGAAATTGCGATTGCCTCTCTCAAAGCAGGTGCTTTTGATTTTGTCAGCAAACC
GATTAACCAATTACATCTGCAACAGCTTTTACAAAAAGCTTTGCATGTACCACAGTTAAGAGAAACGATCAGCGATGCGC
CGCTTGAGGAATCAATGCTCATCGGCGATTCACAGGTGATACGTAAGTTAAGAGAATCGATTAAAAAAATTGCCCGTTCA
CAAGCACCTGTGTTTATCACCGGTGAATCTGGAACAGGCAAAGAGGTTGTTGCCAATCTCATCCATCTACTCAGCAACCG
CAGTGATAGCCCTTTTGTTGCGATTAATTGTGGTGCAATTTCTGAAGACTTGATGGAGAGTGAGCTGTTTGGGCATAAAA
AAGGCTGTTTTTCAGGTGCAACTCAAGACAAACAAGGCCTTATTCAAGCTGCCAATGGTGGTACTCTGTTTTTAGATGAA
ATTGCAGAACTTTCTTTGGCCATGCAAGCCAAACTGTTACGAGCTTTACAAGAAAAGAAAATTCGTCCTTTAGGCAGTGA
TACCGAAATCGAAGTTGATTTCCGTATTATCAGTGCTACACATCAAGACATTGAAGCATTCGTTGAACAAGGCAAATTCC
GCCATGATCTGTTCTTTAGAATTCATGTGATGGATATTGTCCTGCCACCATTGCGCGAACGTGATTGTGATATTCTGATT
TTAGCCAACCATTTTCTTCAGCAAATTTGTACAGAGTGGCGTATTTCAACAAAGTCTTTTACTGAACAAGCCAAAGCTTT
TCTTTTGCAACAGCATTACTCAGGCAATGTTCGTGAATTACGCAATATCATTGAAAAAGCCATTACCATGAGTGATGAAG
ACTATATTGATATTCAACAGCTACAACCTGCTCCACATCGTGGTATCAACAAAGTCGAATCACGTGATCCTATCCAAAGT
CAAGTCTTGCCTATCGTCACCGCGAATAAAGCCCAAAACATTCCAGAAGAAGGGTTGGAGCAATATTTGGAAAAAGTCGA
AAAAGAAGTGTTGTTATCTGCATTAAATCAAACCCATTGGAACCGCACTTTAGCTGCTAAGAAATTGGGCATGACATTTC
GCTCTTTACGCTATCGTTTGAAAAAGTTTGGTTTAGATACCGATGATGATGAATAG

Domains

Predicted by InterproScan.

• Response regulator receiver domain (Response_reg) (8-117)

• Bacterial regulatory protein, Fis family (HTH_8) (423-463)

• Sigma-54 interaction domain (Sigma54_activat) (140-306)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilR	Acinetobacter baumannii strain A118	68.577	100	0.686
pilR	Pseudomonas aeruginosa PAK	46.97	98.089	0.461