Detailed information    

insolico Bioinformatically predicted

Overview

Name   crp   Type   Regulator
Locus tag   ACOFKY_RS07505 Genome accession   NZ_OZ241355
Coordinates   1592759..1593469 (+) Length   236 a.a.
NCBI ID   WP_004721139.1    Uniprot ID   A0A077KYT9
Organism   MAG: Acinetobacter sp. isolate 91b77bb6-a760-4576-a270-dd86adb6cd71     
Function   regulate competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 1587759..1598469
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACOFKY_RS07475 - 1588748..1589206 (-) 459 WP_333667274.1 hypothetical protein -
  ACOFKY_RS07480 - 1589209..1589835 (-) 627 WP_335954936.1 hypothetical protein -
  ACOFKY_RS07485 - 1589842..1590405 (-) 564 WP_335954937.1 PAAR domain-containing protein -
  ACOFKY_RS07490 - 1590398..1590841 (-) 444 WP_419820523.1 PAAR domain-containing protein -
  ACOFKY_RS07495 - 1591198..1592001 (+) 804 WP_419327387.1 peptidoglycan DD-metalloendopeptidase family protein -
  ACOFKY_RS07500 - 1592185..1592607 (-) 423 WP_336953120.1 OsmC family protein -
  ACOFKY_RS07505 crp 1592759..1593469 (+) 711 WP_004721139.1 cAMP-activated global transcriptional regulator CRP Regulator
  ACOFKY_RS07510 - 1593799..1594848 (+) 1050 WP_336953122.1 NADP(H)-dependent aldo-keto reductase -
  ACOFKY_RS07515 - 1594943..1595728 (-) 786 WP_336953123.1 M48 family metallopeptidase -
  ACOFKY_RS07520 - 1595840..1596145 (-) 306 WP_419820524.1 hypothetical protein -
  ACOFKY_RS07525 - 1596286..1597077 (-) 792 WP_336953126.1 M48 family metallopeptidase -

Sequence

Protein


Download         Length: 236 a.a.        Molecular weight: 26563.18 Da        Isoelectric Point: 4.6726

>NTDB_id=1170771 ACOFKY_RS07505 WP_004721139.1 1592759..1593469(+) (crp) [MAG: Acinetobacter sp. isolate 91b77bb6-a760-4576-a270-dd86adb6cd71]
MSSNFAQLSTDALSPGQLPESVKALLKRAHINRFPKRSTIIDAGSESKSLYLILKGSVSIILREDDEREIVVAYLNPGDF
FGEMGLFEQNPQRTAEVRTRDVCEIAEISYDNFHEISKQYPDLSYAVFAQLVRRLKNTTRKVTDLAFIDVSGRIARCLID
LSAQPEAMILPNGRQIRITRQEIGRIVGCSREMVGRVLKTLEEQGMIETDGKAILIFDVSLEESNFSEDELSTDDE

Nucleotide


Download         Length: 711 bp        

>NTDB_id=1170771 ACOFKY_RS07505 WP_004721139.1 1592759..1593469(+) (crp) [MAG: Acinetobacter sp. isolate 91b77bb6-a760-4576-a270-dd86adb6cd71]
ATGTCTTCTAATTTTGCACAACTTAGTACAGATGCTTTGTCTCCTGGTCAACTACCTGAGTCAGTCAAAGCTTTGCTCAA
AAGAGCCCACATCAATCGTTTTCCAAAACGCTCAACGATTATTGATGCAGGTTCAGAGTCAAAATCACTGTATTTAATTT
TAAAAGGTTCAGTTTCAATTATTTTACGTGAAGATGATGAACGTGAAATTGTTGTTGCATATTTGAACCCTGGGGACTTT
TTTGGGGAAATGGGATTATTTGAGCAGAATCCACAACGTACTGCGGAAGTAAGAACCCGTGACGTATGTGAAATTGCTGA
AATTTCATATGATAATTTCCACGAAATTAGTAAACAATATCCTGACTTAAGTTATGCCGTATTTGCACAACTTGTTCGTC
GTTTAAAAAATACAACACGCAAAGTAACTGACCTTGCATTTATTGATGTATCTGGTCGTATTGCACGTTGTTTAATTGAT
CTTTCAGCACAGCCTGAAGCGATGATCTTGCCAAACGGTCGCCAAATCCGCATTACTCGCCAAGAAATTGGTCGTATCGT
GGGTTGTTCCCGTGAAATGGTTGGTCGTGTTCTAAAAACACTTGAAGAACAAGGCATGATCGAAACCGACGGTAAAGCCA
TCCTTATATTTGATGTATCTTTAGAAGAATCTAATTTTTCTGAAGACGAACTAAGCACAGATGACGAATAA

Domains

Predicted by InterproScan.

Crp-like helix-turn-helix domain (HTH_Crp_2)

(152-219)

Cyclic nucleotide-binding domain (cNMP_binding)

(33-120)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A077KYT9

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  crp Acinetobacter baumannii D1279779

91.304

97.458

0.89
  crp Vibrio cholerae strain A1552

48.293

86.864

0.419
  crp Haemophilus influenzae Rd KW20

48.705

81.78

0.398

Multiple sequence alignment