Detailed information NTG1170422

Bioinformatically predicted

Overview

• Name: amiA3
• Type: Regulator
• Locus tag: ACLV7W_RS01565
• Genome accession: NZ_OZ217346
• Coordinates: 320361..322340 (+)
• Length: 659 a.a.
• NCBI ID: WP_411865309.1
• Uniprot ID: -
• Organism: Streptococcus mitis isolate S. mitis D22
• Function: binding to XIP (predicted from homology) Competence regulation

Related MGE

Note: This gene co-localizes with putative mobile genetic elements (MGEs) in the genome predicted by VRprofile2, as detailed below.

Gene-MGE association summary

MGE type	MGE coordinates	Gene coordinates	Relative position	Distance (bp)
IScluster/Tn	322482..325176	320361..322340	flank	142

Gene organization within MGE regions

Location: 320361..325176

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACLV7W_RS01565 (SMID22_03170)	amiA3	320361..322340 (+)	1980	WP_411865309.1	peptide ABC transporter substrate-binding protein	Regulator
ACLV7W_RS01570 (SMID22_03180)	-	322482..323498 (-)	1017	Protein_288	ISL3 family transposase	-
ACLV7W_RS01580 (SMID22_03210)	-	324935..325176 (-)	242	Protein_290	transposase family protein	-

Sequence

Protein

• Length: 659 a.a.
• Molecular weight: 73029.62 Da
• Isoelectric Point: 4.8299

>NTDB_id=1170422 ACLV7W_RS01565 WP_411865309.1 320361..322340(+) (amiA3) [Streptococcus mitis isolate S. mitis D22]
MKTRKVLALAGVTLLAAGVLAACSGGSATKGEQTFAFTYETDPDNLNYLTTGKAATADITSNVIDGLLENDKYGNLIPSM
AEDWSVSKDGLTYTYKIRQDAKWYTSEGEEYAPVKAQDFVTGLKYATDKKSEALYLVQDSIKGLDAYAKGENKDFSQVGI
KAIDDQTVQYTLNKPESFWNSKTTMGVLAPVNEEFLNSKGDDFAKATDPSSILYNGPYLLKSIVTKSAVEFAKNPNYWDK
DNVHIDKVKLSFWDGQDTSKPAENFKDGSLTAARLYPTSASFAELEKEMKDNIVYTQQDSTTYVVGTNIDRQSYKYTSKT
SEEQKTSTKKALLNKDFRQAIAFGFDRTAYASQLNGQTGASKILRNIFVPPTFVQADGKNFGDMVKEKLVTYGDEWKDVN
LADAQDGLYNPEKAKAEFAKAKSALQAEGVQFPIHLDMPVDQTATTKVQRVQSMKQSLEATLGTDNVIIDIQQLQKDEVL
NVTLFAQTAAGEDWDLSDNVGWGPDFSDPSTYLDIIKPSVGENTRTYLGFDSGKDNEAAKKVGLNDYDKMVNEAGEETTD
VTKRYNKYAEAQAWLTDSALVIPTTSKTGRPILSKMVPFTLPFSFSGNKGTSDPLRYKYLELQDKAVTADEYQKAQDKWM
KEKGESNKKAQEELAKHVK

Nucleotide

• Length: 1980 bp

>NTDB_id=1170422 ACLV7W_RS01565 WP_411865309.1 320361..322340(+) (amiA3) [Streptococcus mitis isolate S. mitis D22]
ATGAAAACAAGGAAAGTATTGGCTCTTGCGGGAGTCACTTTATTAGCAGCTGGTGTCTTAGCGGCTTGTTCTGGTGGTTC
TGCTACTAAAGGTGAGCAGACTTTTGCATTTACCTATGAGACAGACCCAGATAATCTCAACTACTTAACAACTGGTAAGG
CAGCGACTGCTGATATTACTAGTAATGTGATTGATGGATTGCTTGAGAATGATAAATACGGGAACCTTATTCCCTCAATG
GCAGAGGACTGGTCAGTTTCTAAGGATGGCTTGACTTACACTTATAAGATTCGTCAGGATGCTAAGTGGTATACATCTGA
GGGAGAAGAGTATGCTCCTGTTAAGGCTCAGGACTTTGTGACAGGTCTTAAATATGCGACAGATAAGAAATCAGAAGCCC
TTTACTTGGTACAAGATTCAATTAAAGGTTTGGACGCATACGCTAAAGGGGAAAATAAAGATTTCTCTCAAGTTGGGATT
AAAGCGATTGACGATCAAACAGTCCAATACACTTTGAACAAACCTGAAAGTTTTTGGAATTCTAAAACAACCATGGGTGT
CTTGGCACCAGTTAATGAAGAGTTTTTGAACTCAAAAGGGGATGATTTTGCCAAAGCAACAGATCCAAGTAGTATCTTGT
ACAATGGTCCTTATTTGTTGAAATCTATTGTAACCAAATCTGCTGTTGAATTTGCGAAAAATCCTAACTACTGGGATAAA
GACAATGTCCATATTGACAAAGTGAAATTGTCATTCTGGGATGGTCAAGATACTAGTAAACCTGCAGAAAACTTTAAAGA
TGGTAGCTTAACAGCAGCTCGTCTCTATCCAACTAGTGCAAGTTTTGCAGAGCTTGAGAAAGAGATGAAGGATAATATTG
TCTATACACAACAAGATTCTACGACTTATGTAGTGGGGACAAATATTGACCGTCAGTCCTACAAATATACTTCTAAGACT
AGCGAAGAACAAAAGACATCTACTAAAAAGGCTCTCTTAAACAAGGATTTCCGTCAGGCGATTGCTTTTGGTTTTGATCG
TACGGCCTATGCCTCTCAGTTGAATGGACAAACTGGAGCAAGCAAAATCTTACGTAATATCTTTGTTCCACCAACATTTG
TTCAAGCAGATGGTAAAAACTTTGGAGATATGGTCAAAGAAAAATTGGTGACTTATGGGGATGAATGGAAGGATGTGAAC
CTTGCCGATGCACAAGATGGTCTTTACAATCCAGAAAAAGCCAAGGCTGAATTTGCCAAAGCCAAATCAGCTCTACAAGC
TGAGGGAGTACAATTCCCAATTCACCTAGATATGCCTGTTGACCAAACAGCAACTACAAAAGTTCAGCGCGTCCAATCTA
TGAAACAATCCTTGGAGGCAACTTTAGGAACTGATAATGTCATTATTGATATTCAACAGTTGCAAAAAGATGAAGTACTT
AATGTCACTTTATTTGCACAAACTGCTGCTGGCGAAGATTGGGATCTTTCTGATAACGTTGGATGGGGACCAGACTTCTC
AGATCCATCAACTTATCTTGACATCATCAAGCCTTCTGTAGGGGAAAATACGAGAACTTACCTAGGATTTGATTCAGGAA
AAGACAATGAGGCGGCTAAGAAGGTTGGTCTCAATGATTATGATAAAATGGTCAATGAAGCAGGTGAAGAAACTACAGAT
GTTACAAAACGTTATAACAAGTATGCCGAAGCTCAAGCTTGGTTGACAGATAGTGCCTTAGTCATCCCAACAACTTCTAA
AACTGGTCGTCCAATCTTGTCTAAGATGGTACCATTTACTTTACCTTTCTCTTTCTCAGGTAACAAGGGGACAAGCGATC
CGCTCCGATACAAATACCTTGAACTTCAAGACAAGGCAGTCACTGCAGATGAATATCAAAAAGCTCAAGATAAATGGATG
AAAGAAAAAGGAGAATCCAATAAAAAAGCGCAAGAAGAACTCGCAAAACATGTGAAATAG

Domains

Predicted by InterproScan.

• Bacterial extracellular solute-binding proteins, family 5 Middle (SBP_bac_5) (76-519)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
amiA3	Streptococcus thermophilus LMD-9	58.636	100	0.587
amiA	Streptococcus salivarius strain HSISS4	58.636	100	0.587
amiA3	Streptococcus thermophilus LMG 18311	58.182	100	0.583