Detailed information    

insolico Bioinformatically predicted

Overview

Name   vicX   Type   Regulator
Locus tag   ACLV7D_RS04975 Genome accession   NZ_OZ217345
Coordinates   1042130..1042939 (+) Length   269 a.a.
NCBI ID   WP_061387624.1    Uniprot ID   -
Organism   Streptococcus mitis isolate S. mitis F22     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 1037130..1047939
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACLV7D_RS04955 (SMIF22_09700) - 1038640..1038765 (-) 126 WP_001818232.1 hypothetical protein -
  ACLV7D_RS04960 (SMIF22_09710) mutY 1038851..1040026 (+) 1176 WP_172934919.1 A/G-specific adenine glycosylase -
  ACLV7D_RS04965 (SMIF22_09720) micA 1040082..1040786 (+) 705 WP_218764537.1 response regulator YycF Regulator
  ACLV7D_RS04970 (SMIF22_09730) micB 1040779..1042128 (+) 1350 WP_050090938.1 cell wall metabolism sensor histidine kinase VicK Regulator
  ACLV7D_RS04975 (SMIF22_09740) vicX 1042130..1042939 (+) 810 WP_061387624.1 MBL fold metallo-hydrolase Regulator
  ACLV7D_RS04980 (SMIF22_09750) - 1043022..1043798 (+) 777 WP_112443739.1 potassium channel family protein -
  ACLV7D_RS04985 tnpA 1043953..1044417 (-) 465 Protein_932 IS200/IS605 family transposase -
  ACLV7D_RS04990 (SMIF22_09770) - 1044767..1045753 (-) 987 WP_000204727.1 L-lactate dehydrogenase -

Sequence

Protein


Download         Length: 269 a.a.        Molecular weight: 29926.93 Da        Isoelectric Point: 6.1738

>NTDB_id=1170371 ACLV7D_RS04975 WP_061387624.1 1042130..1042939(+) (vicX) [Streptococcus mitis isolate S. mitis F22]
MSEIGFKYSILASGSSGNSFYLETPKKKLLVDAGLSGKKITSLLAEINRKPEDLDAILITHEHSDHIHGVGVLARKYGMD
LYANEKTWQAMENSKYLGKVDSSQKHIFEMGKTKTFGDIDIESFGVSHDAVAPQFYRFMKDDKSFVLLTDTGYVSDRMAG
IIENADGYLIESNHDVEILRAGSYAWRLKQRILSDLGHLSNEDGAEAMIRTLGNRTKKIYLGHLSKENNIKELAHMTMVN
QLAQADLGVGVDFKVYDTSPDTATPLTDI

Nucleotide


Download         Length: 810 bp        

>NTDB_id=1170371 ACLV7D_RS04975 WP_061387624.1 1042130..1042939(+) (vicX) [Streptococcus mitis isolate S. mitis F22]
ATGAGTGAAATAGGCTTTAAATATAGTATTTTAGCGTCAGGTTCCAGTGGAAATTCCTTTTATCTGGAAACCCCAAAAAA
GAAGCTTTTAGTGGATGCCGGCTTGTCTGGTAAAAAGATTACTAGCCTACTTGCTGAAATTAACCGCAAACCAGAAGACT
TGGATGCCATCTTGATTACCCATGAGCATTCAGATCATATCCATGGAGTAGGCGTTTTGGCTCGCAAGTATGGTATGGAT
CTTTATGCCAATGAAAAGACCTGGCAAGCTATGGAAAATAGTAAGTATCTTGGTAAGGTGGATTCTTCGCAAAAGCATAT
CTTTGAGATGGGCAAAACCAAAACCTTTGGAGATATTGACATCGAGAGTTTTGGTGTCAGCCATGATGCAGTCGCACCGC
AGTTCTATCGCTTTATGAAAGATGATAAAAGTTTTGTCCTTTTGACAGATACAGGTTATGTCAGTGACCGTATGGCAGGG
ATTATCGAAAATGCGGACGGCTATCTTATCGAGTCCAACCATGATGTAGAGATTTTGCGAGCAGGTTCTTACGCTTGGCG
ACTCAAACAACGAATCCTATCGGATCTGGGTCACCTTTCTAACGAAGATGGTGCCGAAGCCATGATTCGGACGCTAGGAA
ATCGCACTAAGAAAATCTACCTAGGACATTTGTCTAAAGAGAACAATATCAAGGAGCTGGCTCACATGACCATGGTCAAT
CAGCTAGCTCAAGCTGATCTGGGAGTCGGAGTAGACTTTAAGGTTTATGATACCTCACCAGATACCGCCACACCCTTGAC
AGACATATAA

Domains

Predicted by InterproScan.

Metallo-beta-lactamase superfamily (Lactamase_B)

(15-223)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vicX Streptococcus mutans UA159

78.067

100

0.781

Multiple sequence alignment