Detailed information    

insolico Bioinformatically predicted

Overview

Name   vicX   Type   Regulator
Locus tag   ACLV7Z_RS04845 Genome accession   NZ_OZ217343
Coordinates   982687..983496 (+) Length   269 a.a.
NCBI ID   WP_218774838.1    Uniprot ID   -
Organism   Streptococcus mitis isolate S. mitis G22     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 977687..988496
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACLV7Z_RS04825 (SMIG22_09400) - 979035..979322 (-) 288 WP_218774836.1 hypothetical protein -
  ACLV7Z_RS04830 (SMIG22_09410) mutY 979408..980583 (+) 1176 WP_218774837.1 A/G-specific adenine glycosylase -
  ACLV7Z_RS04835 (SMIG22_09420) micA 980639..981343 (+) 705 WP_050259789.1 response regulator YycF Regulator
  ACLV7Z_RS04840 (SMIG22_09430) micB 981336..982685 (+) 1350 WP_050090938.1 cell wall metabolism sensor histidine kinase VicK Regulator
  ACLV7Z_RS04845 (SMIG22_09440) vicX 982687..983496 (+) 810 WP_218774838.1 MBL fold metallo-hydrolase Regulator
  ACLV7Z_RS04850 (SMIG22_09450) relB 983587..983829 (+) 243 WP_050223090.1 type II toxin-antitoxin system RelB family antitoxin -
  ACLV7Z_RS04855 (SMIG22_09460) - 983831..984085 (+) 255 WP_007284771.1 type II toxin-antitoxin system RelE family toxin -
  ACLV7Z_RS04860 (SMIG22_09470) - 984159..986042 (+) 1884 WP_218774839.1 Eco57I restriction-modification methylase domain-containing protein -
  ACLV7Z_RS04865 (SMIG22_09480) - 986152..987102 (+) 951 WP_000658133.1 Abi family protein -

Sequence

Protein


Download         Length: 269 a.a.        Molecular weight: 29914.87 Da        Isoelectric Point: 6.1738

>NTDB_id=1170208 ACLV7Z_RS04845 WP_218774838.1 982687..983496(+) (vicX) [Streptococcus mitis isolate S. mitis G22]
MSETGFKYSILASGSSGNSFYLETPKKKLLVDAGLSGKKITSLLAEINRKPEDLDAILITHEHSDHIHGVGVLARKYGMD
LYANEKTWQAMENSKYLGKVDSSQKHIFEMGKTKTFGDIDIESFGVSHDAVAPQFYRFMKDDKSFVLLTDTGYVSDRMAG
IIENADGYLIESNHDVEILRAGSYAWRLKQRILSDLGHLSNEDGAEAMIRTLGNRTKKIYLGHLSKENNIKELAHMTMVN
QLAQADLGVGVDFKVYDTSPDTATPLTDI

Nucleotide


Download         Length: 810 bp        

>NTDB_id=1170208 ACLV7Z_RS04845 WP_218774838.1 982687..983496(+) (vicX) [Streptococcus mitis isolate S. mitis G22]
ATGAGTGAAACAGGCTTTAAATATAGTATTTTAGCGTCGGGTTCCAGTGGAAATTCCTTTTATCTGGAAACCCCAAAAAA
GAAGCTTTTAGTGGATGCCGGCTTGTCTGGTAAAAAGATTACTAGCCTACTTGCTGAAATTAACCGCAAACCAGAAGACT
TGGATGCCATCTTGATTACCCATGAGCATTCAGATCATATCCATGGAGTAGGCGTTTTGGCTCGCAAGTATGGTATGGAT
CTTTATGCCAATGAAAAGACCTGGCAAGCTATGGAAAATAGTAAGTATCTTGGTAAGGTGGATTCTTCGCAAAAGCATAT
CTTTGAGATGGGCAAAACCAAAACCTTTGGAGATATTGACATCGAGAGTTTTGGTGTCAGCCATGATGCAGTCGCACCGC
AGTTCTATCGCTTTATGAAAGATGATAAAAGTTTTGTCCTTTTGACAGATACAGGTTATGTCAGTGACCGTATGGCAGGG
ATTATCGAAAATGCGGACGGCTATCTTATCGAGTCCAACCATGATGTAGAGATTTTGCGAGCAGGTTCTTACGCTTGGCG
ACTCAAACAACGAATCCTATCGGATCTGGGTCACCTTTCTAACGAAGATGGTGCCGAAGCTATGATTCGGACGCTAGGAA
ATCGCACTAAGAAAATCTACCTTGGGCATTTGTCTAAGGAGAACAATATCAAGGAACTGGCTCACATGACTATGGTCAAT
CAGCTAGCACAAGCTGATCTAGGAGTTGGAGTAGACTTTAAGGTTTATGATACCTCACCAGATACCGCAACACCATTGAC
AGATATATAG

Domains

Predicted by InterproScan.

Metallo-beta-lactamase superfamily (Lactamase_B)

(15-223)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vicX Streptococcus mutans UA159

78.439

100

0.784

Multiple sequence alignment