Detailed information    

insolico Bioinformatically predicted

Overview

Name   amiA3   Type   Regulator
Locus tag   ACLV7Z_RS03730 Genome accession   NZ_OZ217343
Coordinates   721883..723859 (+) Length   658 a.a.
NCBI ID   WP_218774203.1    Uniprot ID   -
Organism   Streptococcus mitis isolate S. mitis G22     
Function   binding to XIP (predicted from homology)   
Competence regulation

Genomic Context

Location: 716883..728859
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACLV7Z_RS03710 (SMIG22_07180) - 717721..718599 (+) 879 WP_000301223.1 F0F1 ATP synthase subunit gamma -
  ACLV7Z_RS03715 (SMIG22_07190) atpD 718685..720091 (+) 1407 WP_000094360.1 F0F1 ATP synthase subunit beta -
  ACLV7Z_RS03720 (SMIG22_07200) - 720102..720521 (+) 420 WP_000068041.1 F0F1 ATP synthase subunit epsilon -
  ACLV7Z_RS03725 (SMIG22_07210) - 720673..721686 (-) 1014 WP_218774204.1 lactonase family protein -
  ACLV7Z_RS03730 (SMIG22_07220) amiA3 721883..723859 (+) 1977 WP_218774203.1 peptide ABC transporter substrate-binding protein Regulator
  ACLV7Z_RS03735 (SMIG22_07230) - 724083..725249 (+) 1167 WP_218774202.1 AI-2E family transporter -
  ACLV7Z_RS03740 (SMIG22_07240) - 725239..726468 (+) 1230 WP_218774201.1 tetratricopeptide repeat protein -
  ACLV7Z_RS03745 (SMIG22_07250) - 726614..727255 (+) 642 WP_000120831.1 amino acid ABC transporter permease -
  ACLV7Z_RS03750 (SMIG22_07260) - 727265..727894 (+) 630 WP_218774200.1 amino acid ABC transporter ATP-binding protein -
  ACLV7Z_RS03755 (SMIG22_07270) - 727904..728743 (+) 840 WP_218774199.1 amino acid ABC transporter substrate-binding protein -

Sequence

Protein


Download         Length: 658 a.a.        Molecular weight: 72305.50 Da        Isoelectric Point: 4.9159

>NTDB_id=1170203 ACLV7Z_RS03730 WP_218774203.1 721883..723859(+) (amiA3) [Streptococcus mitis isolate S. mitis G22]
MKKRVFLAAGVAILSAAMLAACSTGGKDATKPVTYTYVFSTDPTTLDYTVSGTASTKQITGNVIDGLLENDQYGNLIPSV
AEDWTVSKDGLTYTYKIRQGVKWYTNEGEEYGEVKAQDFVTGLKHAADKKSQALYLVQDSVQGLDDYVNGKTTDFSTVGV
KATDDYTVVYTLNHPESFWNSKTTMGVLAPISEDFLASKGDDFGKATDVTSILYNGAYLLKGLTSKSSIEMTKNQNYWDK
QNVFIDDIKLSFFDGQDADSLGRGFDEGHYPAAPLFKNSANYERLKEKYKDNIVYGPQRGGTFYISTNIDRVAYNHTAKT
SDAEKSSTKKALLNKDFRQSLAFAADRTAAVSQVFGDEVAPRKLRTSFTPPTFVQVGEQSFGQVAKAELDKLDSAWKDVS
LDDAQDSLHNVDKAKAKFEVAKKTLQADGVQFPVHLDLPVSSTQTDFIRQAQSYKQSIEEALGSENIVIDIQQVSDDELG
NMTVFATSTNNTDWDINVNSGWSPDYADPSTYLDVFDPTSGPTLLGALGVAPGTDNPAIKAVGLDKFKELITDASGEKID
LQKRYSKYAKAQAWLTDSALVIPVHSDGAQMLITKKVPGSGAGGWVGDKTSENSYKYQKLQDKIVTSKEMDDFRKKFADE
KAKSNADYQKNLDRHIQD

Nucleotide


Download         Length: 1977 bp        

>NTDB_id=1170203 ACLV7Z_RS03730 WP_218774203.1 721883..723859(+) (amiA3) [Streptococcus mitis isolate S. mitis G22]
ATGAAAAAACGAGTTTTTCTAGCAGCTGGTGTAGCTATACTCTCGGCGGCTATGCTAGCAGCGTGTTCAACAGGTGGTAA
AGATGCTACTAAACCTGTTACCTATACCTATGTCTTCTCTACAGACCCTACGACTCTGGATTATACAGTTTCTGGAACTG
CTAGCACTAAACAAATTACAGGTAATGTTATTGATGGTCTACTTGAAAATGACCAATATGGAAATCTGATTCCATCAGTT
GCAGAAGATTGGACTGTTTCAAAAGATGGTTTGACCTATACCTATAAAATCCGTCAGGGTGTCAAATGGTATACCAATGA
AGGCGAAGAGTATGGTGAAGTCAAAGCTCAGGACTTTGTAACTGGTCTGAAGCACGCAGCTGATAAAAAATCACAGGCTC
TTTATCTGGTTCAAGACTCGGTTCAAGGTTTGGACGATTATGTCAATGGGAAAACAACAGATTTCTCTACTGTTGGTGTA
AAAGCGACAGATGATTATACGGTTGTTTACACTTTGAATCATCCAGAATCTTTCTGGAATTCTAAGACAACAATGGGCGT
TCTTGCCCCAATTAGCGAGGACTTTTTGGCTTCTAAAGGAGATGACTTTGGGAAGGCGACTGATGTAACAAGCATTCTTT
ATAATGGTGCTTACCTCCTCAAGGGATTGACATCTAAATCTTCTATTGAGATGACCAAAAATCAAAACTATTGGGATAAG
CAAAATGTCTTTATTGATGATATTAAATTGTCTTTCTTTGATGGTCAGGATGCCGATTCTCTTGGACGAGGTTTTGATGA
GGGACATTATCCAGCGGCACCTCTCTTTAAAAATTCTGCCAATTATGAACGTCTAAAAGAAAAATACAAGGATAATATTG
TGTATGGGCCACAAAGAGGCGGAACTTTCTATATCTCAACTAATATCGATCGTGTAGCTTATAACCATACTGCTAAAACA
AGTGATGCGGAAAAATCATCCACTAAAAAGGCTTTGTTGAATAAAGATTTCCGTCAATCCTTGGCTTTCGCTGCGGATCG
TACTGCTGCAGTATCTCAAGTATTTGGGGACGAAGTGGCACCTCGTAAATTACGTACAAGTTTTACCCCTCCAACATTTG
TCCAAGTTGGAGAGCAGTCATTTGGGCAAGTAGCTAAGGCAGAACTGGATAAGTTGGATAGTGCTTGGAAAGATGTCAGT
CTTGATGATGCACAAGATTCACTTCATAATGTAGACAAGGCTAAAGCTAAATTTGAAGTTGCTAAGAAAACACTTCAAGC
CGATGGAGTACAGTTCCCCGTTCATTTAGACCTGCCAGTTTCCTCTACTCAGACAGATTTTATTCGTCAAGCCCAATCTT
ATAAACAATCCATTGAGGAAGCCTTAGGCTCTGAAAATATAGTGATTGACATTCAACAAGTTTCTGATGATGAATTGGGA
AATATGACAGTATTTGCAACATCGACTAACAATACTGATTGGGATATCAATGTAAATAGTGGTTGGAGTCCTGATTATGC
AGATCCATCAACCTATTTAGATGTATTTGATCCAACATCTGGTCCAACTCTTCTAGGAGCACTTGGTGTAGCACCAGGTA
CAGATAATCCGGCAATCAAAGCTGTTGGTTTAGATAAGTTTAAAGAGTTAATTACGGATGCTAGTGGTGAGAAAATAGAT
CTGCAAAAACGTTATTCTAAATATGCTAAAGCACAAGCTTGGTTAACAGATAGTGCCTTGGTTATTCCTGTACACTCAGA
TGGTGCCCAAATGCTAATAACGAAGAAAGTTCCAGGTAGCGGTGCAGGTGGTTGGGTAGGTGATAAGACAAGTGAAAACA
GCTACAAGTACCAAAAATTACAAGACAAGATTGTAACGTCTAAAGAAATGGATGACTTCCGCAAGAAATTTGCTGATGAA
AAAGCCAAATCAAATGCTGATTATCAGAAGAACTTAGATCGTCATATTCAAGACTAA

Domains

Predicted by InterproScan.

Bacterial extracellular solute-binding proteins, family 5 Middle (SBP_bac_5)

(76-517)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  amiA3 Streptococcus thermophilus LMD-9

54.242

100

0.544
  amiA Streptococcus salivarius strain HSISS4

54.173

100

0.543
  amiA3 Streptococcus thermophilus LMG 18311

53.788

100

0.54

Multiple sequence alignment