Detailed information    

insolico Bioinformatically predicted

Overview

Name   amiA   Type   Regulator
Locus tag   ACLV7Z_RS01455 Genome accession   NZ_OZ217343
Coordinates   265023..266987 (+) Length   654 a.a.
NCBI ID   WP_218774516.1    Uniprot ID   -
Organism   Streptococcus mitis isolate S. mitis G22     
Function   internalize XIP (predicted from homology)   
Competence regulation

Genomic Context

Location: 260023..271987
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACLV7Z_RS01425 (SMIG22_02760) - 260709..262100 (+) 1392 WP_000452111.1 Cof-type HAD-IIB family hydrolase -
  ACLV7Z_RS01430 (SMIG22_02770) - 262097..262255 (+) 159 WP_218774513.1 hypothetical protein -
  ACLV7Z_RS01435 (SMIG22_02780) - 262328..262780 (-) 453 WP_218774514.1 universal stress protein -
  ACLV7Z_RS01440 (SMIG22_02790) - 262942..263235 (+) 294 WP_218774515.1 hypothetical protein -
  ACLV7Z_RS01445 (SMIG22_02800) - 263392..264606 (+) 1215 WP_164226913.1 pyridoxal phosphate-dependent aminotransferase -
  ACLV7Z_RS01450 (SMIG22_02810) rpmH 264751..264885 (+) 135 WP_000831905.1 50S ribosomal protein L34 -
  ACLV7Z_RS01455 (SMIG22_02820) amiA 265023..266987 (+) 1965 WP_218774516.1 peptide ABC transporter substrate-binding protein Regulator
  ACLV7Z_RS01460 - 267537..271094 (+) 3558 Protein_254 YSIRK-type signal peptide-containing protein -

Sequence

Protein


Download         Length: 654 a.a.        Molecular weight: 72785.74 Da        Isoelectric Point: 4.5430

>NTDB_id=1170178 ACLV7Z_RS01455 WP_218774516.1 265023..266987(+) (amiA) [Streptococcus mitis isolate S. mitis G22]
MKKSKVMLFGAMALTAGLALAACGSSQSSNAEKTYSYVFTSNPDTLDYITSTRGSTSSITTNLIDGLLENDQYGNLIPSM
AESWTVSKDGLTYTYKIRQGAKWYTSEGEEYADVTAHDFVTGLKYAADKKAENLYLVQDSIKGLAEYVEGETSDFETVGV
KAVDDYTLQYTLNKPESYWNSKTTGGILSPVNEAFLKSKGDDFGSVTPSSILSNGPYLFKSFSSKSLIEFDKNPNYWDKD
NVKIEKVKLSFFDGSDQDSLARGFLEGNYSDGRIFPTSSVFNQLKKGNEDKITYTPQNSITFYYLFNVNRQSYKQTMKQS
DKEKTDSLAAMQNKDFRQAVNFAFDRHAYAAQTNGEDGADRILRNTLIPSDFVQIGGKNFGDVVNEKIINYGTEWSNINL
NDAQPAFLNAEKAKVAFAKAKETLQAEGVTFPIHLDMPVDQTAKLDVQQASSFKQTVEETLGADNIVIDVIQLSPDEKDQ
ATFFADTAEQKDYDIDISGWSGDYSDPKTYLDLLDPESGSQLNNIGLTAGKDNEVKEKIGLSAYKKLLDEADSEVANTQA
RYEKFAEVQAWLTDSTLFLPVQSGGANPIFRKTVPFTGAFSFVGHKGDADNYKYVELQKEPVTAKQYQELYEKWLKEKAE
SNKKAQEDLANHIQ

Nucleotide


Download         Length: 1965 bp        

>NTDB_id=1170178 ACLV7Z_RS01455 WP_218774516.1 265023..266987(+) (amiA) [Streptococcus mitis isolate S. mitis G22]
ATGAAGAAATCAAAAGTTATGCTTTTTGGAGCTATGGCTTTGACAGCAGGTCTAGCTCTAGCGGCATGTGGGTCTTCCCA
ATCAAGCAACGCTGAGAAAACCTACTCTTATGTATTTACTAGTAATCCTGATACCTTGGACTACATTACGTCAACGCGTG
GCTCTACTTCAAGTATCACGACCAACCTGATTGATGGCTTGTTAGAAAATGATCAGTATGGTAATCTCATTCCATCTATG
GCTGAGTCATGGACGGTGTCAAAAGATGGTTTGACCTACACTTATAAAATCCGTCAGGGGGCGAAATGGTACACTTCAGA
GGGCGAAGAGTATGCGGATGTAACGGCTCATGACTTTGTGACAGGTCTCAAGTATGCAGCTGATAAAAAGGCTGAAAACT
TGTACTTGGTTCAAGACTCTATCAAGGGCCTCGCAGAGTACGTTGAGGGAGAAACATCTGACTTTGAGACTGTTGGAGTT
AAAGCAGTGGATGACTATACTCTTCAATATACTTTGAATAAGCCGGAATCTTACTGGAATTCTAAGACTACTGGGGGCAT
TTTGAGTCCTGTAAATGAAGCTTTTTTGAAATCTAAGGGAGATGACTTTGGAAGTGTAACACCATCCAGTATCTTGTCAA
ATGGTCCTTACTTGTTTAAATCTTTCTCATCAAAATCTTTGATTGAATTTGATAAAAACCCTAATTACTGGGATAAGGAC
AATGTGAAAATTGAGAAAGTGAAGCTCTCTTTCTTTGACGGTTCTGATCAAGATAGTTTAGCGAGAGGATTTTTGGAAGG
GAACTACTCGGACGGTCGTATCTTCCCGACAAGTTCAGTGTTTAATCAGTTGAAAAAAGGGAATGAGGACAAAATCACCT
ACACACCACAAAACTCAATTACCTTTTATTATCTTTTTAACGTTAATCGTCAAAGCTACAAGCAGACCATGAAACAGTCT
GATAAGGAAAAGACAGATTCACTTGCGGCCATGCAAAATAAGGATTTCCGTCAGGCTGTCAACTTTGCCTTTGACCGTCA
TGCTTATGCAGCGCAGACAAATGGTGAAGATGGAGCAGACCGTATCTTGCGTAACACGCTTATCCCAAGTGATTTTGTCC
AAATCGGTGGTAAAAACTTTGGAGATGTTGTCAATGAAAAGATTATTAACTATGGTACAGAGTGGTCGAATATCAATTTG
AATGATGCGCAACCTGCCTTTTTGAATGCTGAAAAAGCCAAGGTAGCATTTGCTAAAGCTAAAGAAACCTTGCAAGCAGA
AGGCGTGACCTTCCCAATTCATTTGGATATGCCGGTTGACCAGACGGCCAAGTTAGATGTGCAACAAGCAAGTTCCTTTA
AGCAGACAGTGGAAGAAACCCTTGGGGCGGACAACATTGTGATTGACGTGATTCAACTTTCTCCAGACGAGAAGGATCAA
GCTACATTCTTTGCAGATACAGCTGAACAAAAGGACTATGACATTGATATTTCAGGTTGGAGCGGAGATTACTCAGATCC
GAAAACTTATCTTGATCTCTTGGATCCAGAGTCAGGTTCTCAGCTTAATAATATTGGTTTGACTGCTGGAAAAGATAATG
AAGTAAAAGAAAAAATTGGACTTTCTGCTTACAAGAAGTTACTAGATGAAGCAGATAGCGAAGTTGCAAATACTCAGGCT
CGTTATGAAAAATTTGCTGAAGTACAAGCTTGGTTGACTGACAGCACCCTCTTCCTACCAGTTCAAAGTGGCGGAGCCAA
CCCAATCTTCCGTAAGACTGTACCGTTTACAGGAGCTTTCTCTTTCGTTGGTCATAAGGGAGATGCTGACAACTACAAAT
ATGTTGAACTGCAAAAAGAGCCGGTAACTGCGAAACAGTACCAAGAACTCTATGAAAAATGGTTAAAAGAAAAAGCTGAG
TCAAATAAAAAAGCTCAGGAAGATTTGGCTAACCATATTCAATAA

Domains

Predicted by InterproScan.

Bacterial extracellular solute-binding proteins, family 5 Middle (SBP_bac_5)

(76-515)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  amiA Streptococcus salivarius strain HSISS4

55.927

100

0.563
  amiA3 Streptococcus thermophilus LMD-9

54.711

100

0.55
  amiA3 Streptococcus thermophilus LMG 18311

54.407

100

0.547

Multiple sequence alignment