Detailed information    

insolico Bioinformatically predicted

Overview


Name   ccpA   Type   Regulator
Locus tag   ACLV7Z_RS01410 Genome accession   NZ_OZ217343
Coordinates   258239..259249 (+) Length   336 a.a.
NCBI ID   WP_000990603.1    Uniprot ID   -
Organism   Streptococcus mitis isolate S. mitis G22     
Function   regulate comCDE transcription and transformation (predicted from homology)   
Competence regulation

Genomic Context


Location: 253239..264249
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACLV7Z_RS01380 (SMIG22_02670) - 254215..254421 (+) 207 WP_218774506.1 hypothetical protein -
  ACLV7Z_RS01385 (SMIG22_02680) - 254418..254612 (+) 195 WP_218774507.1 hypothetical protein -
  ACLV7Z_RS01390 (SMIG22_02690) - 254599..255483 (+) 885 WP_001055973.1 ABC transporter ATP-binding protein -
  ACLV7Z_RS01395 (SMIG22_02700) - 255485..256222 (+) 738 WP_218774508.1 ABC transporter permease -
  ACLV7Z_RS01400 (SMIG22_02710) - 256222..257319 (+) 1098 WP_218774509.1 sensor histidine kinase -
  ACLV7Z_RS01405 (SMIG22_02720) - 257321..257920 (+) 600 WP_218774510.1 response regulator transcription factor -
  ACLV7Z_RS01410 (SMIG22_02730) ccpA 258239..259249 (+) 1011 WP_000990603.1 catabolite control protein A Regulator
  ACLV7Z_RS01415 (SMIG22_02740) - 259313..259696 (+) 384 WP_218774511.1 hypothetical protein -
  ACLV7Z_RS01420 (SMIG22_02750) - 259681..260643 (-) 963 WP_218774512.1 asparaginase -
  ACLV7Z_RS01425 (SMIG22_02760) - 260709..262100 (+) 1392 WP_000452111.1 Cof-type HAD-IIB family hydrolase -
  ACLV7Z_RS01430 (SMIG22_02770) - 262097..262255 (+) 159 WP_218774513.1 hypothetical protein -
  ACLV7Z_RS01435 (SMIG22_02780) - 262328..262780 (-) 453 WP_218774514.1 universal stress protein -
  ACLV7Z_RS01440 (SMIG22_02790) - 262942..263235 (+) 294 WP_218774515.1 hypothetical protein -

Sequence


Protein


Download         Length: 336 a.a.        Molecular weight: 37050.07 Da        Isoelectric Point: 5.5357

>NTDB_id=1170177 ACLV7Z_RS01410 WP_000990603.1 258239..259249(+) (ccpA) [Streptococcus mitis isolate S. mitis G22]
MNADDTVTIYDVAREAGVSMATVSRVVNGNKNVKENTRKKVLEVIDRLDYRPNAVARGLASKKTTTVGVVIPNITNGYFS
SLAKGIDDIAEMYKYNIVLANSDEDNEKEVSVVNTLFSKQVDGIIFMGYHLTDKIRSEFSRSRTPIVLAGTVDVEHQLPS
VNIDYKQATIDAVSYLAKENERIAFVSGPLVDDINGKVRLVGYKEALKKAGIAYSEGLVFESKYSYDDGYALAERLISSN
ATAAVVTGDELAAGVLNGLADKGVSVPEDFEIITSDDSQIARFTRPNLTTIAQPLYDLGAISMRMLTKIMHKEELEEREV
LLPHGLTERRSTRKRK

Nucleotide


Download         Length: 1011 bp        

>NTDB_id=1170177 ACLV7Z_RS01410 WP_000990603.1 258239..259249(+) (ccpA) [Streptococcus mitis isolate S. mitis G22]
ATGAATGCAGATGATACAGTAACCATTTATGATGTCGCTCGTGAAGCAGGTGTTTCCATGGCGACGGTCAGCCGTGTGGT
CAATGGCAATAAAAATGTAAAAGAGAATACCCGTAAAAAAGTGCTAGAGGTAATTGATCGTTTGGATTATCGTCCAAATG
CAGTTGCGCGTGGTCTTGCAAGTAAAAAGACAACCACTGTCGGTGTCGTGATTCCAAATATTACCAATGGTTATTTTTCG
AGTTTGGCTAAGGGGATTGATGATATTGCAGAAATGTACAAGTACAATATTGTCCTAGCTAATAGCGATGAAGATAACGA
GAAAGAAGTTTCTGTTGTCAATACTCTCTTTTCAAAGCAGGTAGATGGCATTATCTTTATGGGTTATCACTTGACAGATA
AAATTCGCTCAGAATTTTCGCGTTCACGTACTCCGATTGTTCTCGCAGGAACTGTCGATGTTGAGCATCAGTTGCCAAGT
GTCAATATTGACTATAAGCAAGCAACGATTGATGCAGTGAGTTACCTTGCTAAAGAAAATGAGCGTATTGCTTTCGTTAG
CGGTCCGCTAGTGGATGACATCAATGGTAAGGTTCGTTTAGTTGGCTACAAGGAAGCCTTGAAAAAAGCAGGAATCGCTT
ATAGTGAGGGTTTGGTATTTGAATCTAAATATAGCTATGATGATGGTTACGCCTTGGCAGAGCGTTTGATTTCATCGAAT
GCAACTGCAGCAGTTGTGACAGGTGATGAGTTGGCAGCAGGAGTCTTGAACGGTTTGGCTGATAAGGGTGTTTCTGTGCC
AGAAGATTTTGAAATTATTACTAGTGATGATTCGCAAATTGCACGCTTTACCCGTCCAAACTTGACAACGATTGCCCAAC
CTCTTTATGACCTTGGTGCCATTAGTATGCGTATGTTGACTAAGATTATGCATAAGGAAGAGTTGGAAGAACGTGAAGTT
CTCTTACCTCATGGTTTGACAGAACGTCGCTCAACACGAAAACGGAAATAG


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ccpA Streptococcus pneumoniae D39

98.214

100

0.982

  ccpA Streptococcus gordonii str. Challis substr. CH1

87.425

99.405

0.869

  ccpA Lactococcus lactis subsp. lactis strain DGCC12653

58.006

98.512

0.571


Multiple sequence alignment