Detailed information NTG0117016

Bioinformatically predicted

Overview

• Name: rapC
• Type: Regulator
• Locus tag: AW03_RS02020
• Genome accession: NZ_CP007173
• Coordinates: 403915..405063 (+)
• Length: 382 a.a.
• NCBI ID: WP_014475800.1
• Uniprot ID: A0A0D1KXJ1
• Organism: Bacillus subtilis HJ5
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 398915..410063

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AW03_RS02000 (AW03_003690)	yclH	399291..399971 (-)	681	WP_015382762.1	ABC transporter ATP-binding protein	-
AW03_RS02005 (AW03_003700)	yclI	399987..401447 (-)	1461	WP_015382763.1	ABC transporter permease	-
AW03_RS02010 (AW03_003710)	yclJ	401660..402343 (+)	684	WP_015482792.1	two-component system response regulator YclJ	-
AW03_RS02015 (AW03_003720)	yclK	402330..403751 (+)	1422	WP_080030630.1	two-component system sensor histidine kinase YclK	-
AW03_RS02020 (AW03_003730)	rapC	403915..405063 (+)	1149	WP_014475800.1	response regulator aspartate phosphatase RapC	Regulator
AW03_RS02025 (AW03_003740)	phrC	405047..405169 (+)	123	WP_003224994.1	phosphatase RapC inhibitor PhrC	Regulator
AW03_RS20720	yczM	405269..405358 (-)	90	WP_015482794.1	YjcZ family sporulation protein	-
AW03_RS20725 (AW03_003750)	yczN	405440..405553 (-)	114	WP_014478831.1	YjcZ family sporulation protein	-
AW03_RS02040 (AW03_003760)	thrD	405706..407070 (-)	1365	WP_015382767.1	aspartate kinase	-
AW03_RS02045 (AW03_003770)	ceuB	407455..408405 (+)	951	WP_015382768.1	petrobactin ABC transporter permease YclN	Machinery gene
AW03_RS02050 (AW03_003780)	yclO	408398..409345 (+)	948	WP_014475805.1	petrobactin ABC transporter permease YclO	-

Sequence

Protein

• Length: 382 a.a.
• Molecular weight: 45649.65 Da
• Isoelectric Point: 4.9618

>NTDB_id=117016 AW03_RS02020 WP_014475800.1 403915..405063(+) (rapC) [Bacillus subtilis HJ5]
MKSGVIPSSAVGQKINEWYRYIRTFSVPDAEVLKAEIQQELKHMQHDSNLLLYYSLMEFRHQLMLDYLEPLEKLNIEDQP
SLSELSRNIDSNQADLKGLLDYYVNFFRGMYEFDKREFISAITYYKQAEKKLSFVADHIERAEFYFKIAEAYYYMKQTYF
SLINIKNAYEIYVEQETYNVRIIQCHFVFGVNLMDERNFEQAARHFKLALNMAQAEQKAQLVGRAYYNLGLCYYNQDLLD
PAIDYFEKAVSTFESSRIVNSLPQAYFLITLIYYKQGKHDKASEYHKRGYEYAKETDDADYAVKFEFLQSLYQDQPNEEG
IERCFQYLKNKNMYADIEDLALEVAKYYYEQKWFKLSASYFLQVEEARKQIQRSEGLYEIEI

Nucleotide

• Length: 1149 bp

>NTDB_id=117016 AW03_RS02020 WP_014475800.1 403915..405063(+) (rapC) [Bacillus subtilis HJ5]
ATGAAGAGCGGGGTAATTCCTTCTTCAGCGGTCGGTCAAAAAATTAACGAGTGGTACAGATATATCCGGACATTCAGCGT
GCCGGATGCCGAAGTGTTAAAAGCTGAAATCCAGCAGGAACTGAAACACATGCAGCATGATTCCAACTTGCTGCTTTATT
ATTCACTAATGGAATTCCGGCACCAGCTTATGCTGGATTATCTTGAGCCGTTAGAGAAATTAAATATCGAAGACCAGCCA
AGCCTGTCTGAATTATCAAGAAACATTGACAGCAACCAGGCAGATCTCAAAGGGCTGCTCGACTATTACGTGAATTTTTT
TCGCGGGATGTATGAGTTTGATAAGCGGGAATTTATTTCTGCCATTACATACTATAAACAGGCGGAGAAAAAGCTCTCCT
TTGTCGCAGACCATATTGAACGGGCTGAATTCTATTTTAAAATCGCGGAAGCTTATTATTATATGAAGCAAACGTATTTT
TCATTGATTAATATAAAAAACGCTTATGAAATTTACGTGGAGCAGGAAACCTATAATGTGAGAATCATTCAATGCCATTT
CGTGTTCGGGGTCAACCTGATGGATGAAAGAAATTTCGAACAAGCCGCACGCCATTTCAAATTGGCGCTCAATATGGCCC
AAGCGGAACAAAAAGCCCAGCTGGTCGGAAGAGCATACTACAATCTCGGATTATGCTATTACAATCAAGACCTTCTAGAC
CCTGCCATTGATTACTTTGAAAAAGCGGTCTCCACGTTTGAAAGCAGCAGGATCGTCAATTCTCTCCCGCAAGCCTATTT
TTTAATCACCCTGATTTATTATAAACAGGGAAAACATGATAAAGCTTCGGAATATCACAAGCGGGGCTATGAATATGCTA
AAGAAACAGACGATGCAGACTATGCCGTAAAATTCGAGTTTTTGCAATCCCTATATCAGGATCAGCCCAATGAAGAAGGA
ATCGAACGATGTTTCCAATACTTAAAAAATAAAAATATGTACGCTGATATAGAGGATTTAGCCCTAGAAGTAGCAAAATA
CTACTATGAACAGAAATGGTTTAAACTGTCTGCTTCCTATTTTCTACAAGTTGAAGAGGCAAGAAAACAAATACAAAGGA
GTGAAGGTTTGTATGAAATTGAAATCTAA

Domains

Predicted by InterproScan.

• Tetratricopeptide repeat (TPR_12) (223-294)

• response regulator aspartate phosphatase H, N terminal (RapH_N) (5-66)

3D structure

• AlphaFold DB: A0A0D1KXJ1

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapC	Bacillus subtilis subsp. subtilis str. 168	99.738	100	0.997
rapF	Bacillus subtilis subsp. subtilis str. 168	57.105	99.476	0.568