Detailed information    

insolico Bioinformatically predicted

Overview

Name   vicX   Type   Regulator
Locus tag   ACLV65_RS04805 Genome accession   NZ_OZ217342
Coordinates   944335..945144 (+) Length   269 a.a.
NCBI ID   WP_050302726.1    Uniprot ID   A0A139PTX0
Organism   Streptococcus mitis isolate S. mitis B22     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 939335..950144
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACLV65_RS04785 (SMIB22_09330) - 940812..940970 (-) 159 WP_240149564.1 hypothetical protein -
  ACLV65_RS04790 (SMIB22_09340) mutY 941056..942231 (+) 1176 WP_411864682.1 A/G-specific adenine glycosylase -
  ACLV65_RS04795 (SMIB22_09350) micA 942287..942991 (+) 705 WP_411864683.1 response regulator YycF Regulator
  ACLV65_RS04800 (SMIB22_09360) micB 942984..944333 (+) 1350 WP_050090938.1 cell wall metabolism sensor histidine kinase VicK Regulator
  ACLV65_RS04805 (SMIB22_09370) vicX 944335..945144 (+) 810 WP_050302726.1 MBL fold metallo-hydrolase Regulator
  ACLV65_RS04810 (SMIB22_09380) relB 945235..945477 (+) 243 WP_172930976.1 type II toxin-antitoxin system RelB family antitoxin -
  ACLV65_RS04815 (SMIB22_09390) - 945479..945733 (+) 255 WP_033684234.1 type II toxin-antitoxin system RelE family toxin -
  ACLV65_RS04820 (SMIB22_09400) - 945809..947707 (+) 1899 WP_411864684.1 Eco57I restriction-modification methylase domain-containing protein -
  ACLV65_RS04825 (SMIB22_09410) - 947817..948767 (+) 951 WP_172922723.1 Abi family protein -

Sequence

Protein


Download         Length: 269 a.a.        Molecular weight: 29926.93 Da        Isoelectric Point: 6.1743

>NTDB_id=1170124 ACLV65_RS04805 WP_050302726.1 944335..945144(+) (vicX) [Streptococcus mitis isolate S. mitis B22]
MSEIGFKYSILASGSSGNSFYLETPKKKLLVDAGLSGKKITSLLAEINRKPEDLDAILITHEHSDHIHGVGVLARKYGMD
LYANEKTWQAMENSKYLGKVDSSQKHIFEMGKTKTFGDIDIESFGVSHDAVAPQFYRFMKDDKSFVLLTDTGYVSDRMAG
IVENADGYLIESNHDVEILRAGSYAWRLKQRILSDLGHLSNEDGAEAMIRTLGNRTKKIYLGHLSKENNIKELAHMTMVN
QLAQADLGVGVDFKVYDTSPDTATPLTEI

Nucleotide


Download         Length: 810 bp        

>NTDB_id=1170124 ACLV65_RS04805 WP_050302726.1 944335..945144(+) (vicX) [Streptococcus mitis isolate S. mitis B22]
ATGAGTGAAATAGGCTTTAAATACAGTATTTTAGCGTCGGGTTCCAGTGGAAATTCCTTTTATCTGGAAACTCCAAAAAA
GAAGCTTTTAGTGGATGCCGGCTTGTCTGGTAAAAAGATTACTAGCCTACTTGCTGAAATCAACCGCAAACCAGAAGATT
TGGATGCCATCTTGATTACCCATGAGCATTCAGATCATATCCATGGAGTAGGCGTTTTGGCTCGCAAGTATGGTATGGAT
TTGTATGCCAATGAAAAGACTTGGCAGGCTATGGAAAATAGCAAGTATCTTGGCAAGGTGGATTCTTCGCAAAAGCATAT
CTTTGAGATGGGCAAAACCAAAACCTTTGGAGATATCGACATCGAGAGTTTTGGTGTAAGCCATGATGCAGTCGCACCGC
AGTTCTATCGTTTTATGAAGGATGATAAAAGCTTTGTCCTTTTGACAGATACAGGTTATGTCAGTGACCGTATGGCAGGA
ATTGTCGAAAATGCGGACGGCTATCTTATCGAGTCCAACCATGATGTAGAGATTTTGCGAGCAGGATCTTATGCTTGGCG
GCTCAAACAACGAATCCTATCGGATCTCGGTCATCTTTCTAATGAGGACGGTGCTGAAGCTATGATTCGCACCTTAGGAA
ATCGCACTAAGAAAATCTACCTAGGACATTTGTCTAAAGAGAACAATATCAAGGAGCTGGCTCACATGACCATGGTCAAC
CAGCTAGCACAAGCTGATCTGGGAGTTGGAGTAGACTTTAAGGTTTATGATACCTCACCAGATACCGCCACACCTTTGAC
AGAGATATAG

Domains

Predicted by InterproScan.

Metallo-beta-lactamase superfamily (Lactamase_B)

(15-223)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A139PTX0

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vicX Streptococcus mutans UA159

77.695

100

0.777

Multiple sequence alignment