Detailed information    

insolico Bioinformatically predicted

Overview

Name   pptA   Type   Regulator
Locus tag   ACLV7Q_RS08135 Genome accession   NZ_OZ217341
Coordinates   1681921..1682652 (-) Length   243 a.a.
NCBI ID   WP_023940790.1    Uniprot ID   -
Organism   Streptococcus mitis isolate S. mitis C22     
Function   export ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 1676921..1687652
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACLV7Q_RS08100 (SMIC22_15930) blpC 1677220..1677375 (+) 156 WP_218757135.1 quorum-sensing system pheromone BlpC -
  ACLV7Q_RS08105 (SMIC22_15940) - 1677417..1678757 (-) 1341 WP_218757136.1 sensor histidine kinase -
  ACLV7Q_RS08110 (SMIC22_15950) comE/blpR 1678771..1679508 (-) 738 WP_218757137.1 response regulator transcription factor Regulator
  ACLV7Q_RS08115 (SMIC22_15960) - 1679513..1679851 (-) 339 WP_218757138.1 LytTR family DNA-binding domain-containing protein -
  ACLV7Q_RS08120 (SMIC22_15970) - 1680210..1680461 (+) 252 WP_001130045.1 hypothetical protein -
  ACLV7Q_RS08125 (SMIC22_15980) - 1680490..1680813 (+) 324 WP_218757139.1 helicase BlpT -
  ACLV7Q_RS08130 (SMIC22_15990) pptB 1680875..1681924 (-) 1050 WP_218757140.1 ABC transporter permease Regulator
  ACLV7Q_RS08135 (SMIC22_16000) pptA 1681921..1682652 (-) 732 WP_023940790.1 ABC transporter ATP-binding protein Regulator
  ACLV7Q_RS08140 (SMIC22_16010) - 1682720..1683130 (+) 411 WP_218757141.1 HIT family protein -
  ACLV7Q_RS08145 (SMIC22_16020) - 1683140..1683427 (+) 288 WP_049487998.1 hypothetical protein -
  ACLV7Q_RS08150 (SMIC22_16030) dnaJ 1683824..1684963 (-) 1140 WP_112444466.1 molecular chaperone DnaJ -
  ACLV7Q_RS08155 (SMIC22_16040) - 1685233..1685688 (-) 456 WP_050242236.1 hypothetical protein -
  ACLV7Q_RS08160 (SMIC22_16050) dnaK 1685688..1687511 (-) 1824 WP_000034661.1 molecular chaperone DnaK -

Sequence

Protein


Download         Length: 243 a.a.        Molecular weight: 27097.60 Da        Isoelectric Point: 4.7792

>NTDB_id=1170057 ACLV7Q_RS08135 WP_023940790.1 1681921..1682652(-) (pptA) [Streptococcus mitis isolate S. mitis C22]
MLEIKNLTGGYVHVPVLKDVSFTVESGQLVGLIGLNGAGKSTTINEIIGLLTPYSGSININGLTLQEDATSYRKQIGYIP
ETPSLYEELTLREHIETVAMAYGIEQKVAFDRVEPLLKMFRLDQKLDWFPVHFSKGMKQKVMIICAFVVDPSLFIVDEPF
LGLDPLAIADLIQLLEVEKQKGKSILMSTHVLDSAEKMCDAFVILHKGEVRAKGNLLQLREAFNMPEASLNDIYLALTKE
EEL

Nucleotide


Download         Length: 732 bp        

>NTDB_id=1170057 ACLV7Q_RS08135 WP_023940790.1 1681921..1682652(-) (pptA) [Streptococcus mitis isolate S. mitis C22]
ATGTTAGAAATTAAAAACCTGACAGGTGGCTATGTCCATGTTCCTGTCTTGAAAGATGTATCCTTTACCGTTGAAAGTGG
GCAGTTGGTTGGTTTGATTGGTCTCAATGGTGCTGGGAAATCTACGACAATCAATGAGATTATCGGTTTGTTGACACCTT
ATAGTGGCTCCATCAATATCAATGGTCTGACCCTGCAAGAAGACGCGACTAGCTACCGCAAGCAAATTGGCTACATTCCT
GAGACACCTAGCTTGTATGAGGAATTGACTCTCAGAGAGCATATCGAAACGGTTGCTATGGCTTATGGTATTGAGCAGAA
AGTGGCTTTTGATCGAGTAGAACCTTTGTTAAAAATGTTCCGTCTGGACCAGAAATTAGACTGGTTTCCAGTTCATTTTT
CAAAAGGGATGAAGCAGAAAGTCATGATTATCTGTGCTTTTGTGGTGGATCCGAGTCTCTTTATCGTGGATGAGCCTTTC
CTTGGTCTCGATCCGCTGGCTATTGCAGACTTGATTCAGCTTTTGGAAGTGGAAAAGCAAAAGGGCAAGTCCATTCTCAT
GAGTACCCACGTGCTGGATTCAGCGGAAAAGATGTGTGATGCCTTTGTCATTCTTCACAAAGGGGAAGTGCGTGCTAAGG
GAAATCTCCTGCAACTGCGCGAAGCCTTTAACATGCCTGAGGCTAGTTTGAATGATATTTACTTGGCTCTGACCAAAGAG
GAGGAGCTATGA

Domains

Predicted by InterproScan.

ABC transporter (ABC_tran)

(17-160)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pptA Streptococcus salivarius strain HSISS4

72.614

99.177

0.72
  pptA Streptococcus thermophilus LMD-9

71.784

99.177

0.712

Multiple sequence alignment