Detailed information    

insolico Bioinformatically predicted

Overview

Name   amiA3   Type   Regulator
Locus tag   ACLV7Q_RS03675 Genome accession   NZ_OZ217341
Coordinates   710702..712678 (+) Length   658 a.a.
NCBI ID   WP_218757879.1    Uniprot ID   -
Organism   Streptococcus mitis isolate S. mitis C22     
Function   binding to XIP (predicted from homology)   
Competence regulation

Genomic Context

Location: 705702..717678
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACLV7Q_RS03655 (SMIC22_07090) - 706495..707373 (+) 879 WP_000301223.1 F0F1 ATP synthase subunit gamma -
  ACLV7Q_RS03660 (SMIC22_07100) atpD 707459..708865 (+) 1407 WP_000094362.1 F0F1 ATP synthase subunit beta -
  ACLV7Q_RS03665 (SMIC22_07110) - 708876..709295 (+) 420 WP_000068041.1 F0F1 ATP synthase subunit epsilon -
  ACLV7Q_RS03670 (SMIC22_07120) - 709492..710505 (-) 1014 WP_218757878.1 lactonase family protein -
  ACLV7Q_RS03675 (SMIC22_07130) amiA3 710702..712678 (+) 1977 WP_218757879.1 peptide ABC transporter substrate-binding protein Regulator
  ACLV7Q_RS03680 (SMIC22_07140) - 712902..714068 (+) 1167 WP_218757880.1 AI-2E family transporter -
  ACLV7Q_RS03685 (SMIC22_07150) - 714058..715287 (+) 1230 WP_218757881.1 tetratricopeptide repeat protein -
  ACLV7Q_RS03690 (SMIC22_07160) - 715432..716073 (+) 642 WP_031222863.1 amino acid ABC transporter permease -
  ACLV7Q_RS03695 (SMIC22_07170) - 716083..716712 (+) 630 WP_218757882.1 amino acid ABC transporter ATP-binding protein -
  ACLV7Q_RS03700 (SMIC22_07180) - 716725..717561 (+) 837 WP_218757883.1 amino acid ABC transporter substrate-binding protein -

Sequence

Protein


Download         Length: 658 a.a.        Molecular weight: 72604.84 Da        Isoelectric Point: 4.8780

>NTDB_id=1170038 ACLV7Q_RS03675 WP_218757879.1 710702..712678(+) (amiA3) [Streptococcus mitis isolate S. mitis C22]
MKKRVFLAAGVAILSTAMLAACSTGGKDATKPVTYTYVFSTDPTTLDYTVSGNKSTKQVTGNVIDGLLENDQYGNLIPSV
AEDWTVSKDGLTYTYKIRQGVKWYTNEGEEYGEVKAQDFVTGLKHAADKKSQALYLVQDSVQGLDDYVNGKTTDFSTVGV
KATDDYTVVYTLNHPESFWNSKTTMGVLAPISEDFLASKGDDFGKATDVTSILYNGAYLLKGLTSKSSIEMTKNQNYWDK
QNVFIDDIKLSFFDGQDADSLGRGFDEGHYPAAPLFKNSANYERLKEKYKDNIVYGQQRGGVFYMSTNIDRVAYNHTAKT
SDVEKSSTKKALLNKDFRQSLAFAADRTAAVSQVFGDEVAPRKLRTSFTPPTFVQVGEQSFGQVAKAELDKLDSAWKDVS
LDDAQDSLHNVDKAKAKFEVAKKTLQADGVQFPVHLDLPVSSTQTDFIRQAQSYKQSIEEALGSENIVIDIQQVSDDELG
NMTVFATSTDNIDWDINVNSGWSPDYADPSTYLDVFDPTSGPTLLGALGVAPGTDNPAIKSVGLDKFKELITDASGEKTD
LQKRYSKYAKAQAWLTDSALVIPVYSDGAQMLITKKVPGSGADGWVGDKTSEHSYKYQKLQDKIVTSKEMDDFRKKFADE
KAKSNADYQKNLDRHIQE

Nucleotide


Download         Length: 1977 bp        

>NTDB_id=1170038 ACLV7Q_RS03675 WP_218757879.1 710702..712678(+) (amiA3) [Streptococcus mitis isolate S. mitis C22]
ATGAAAAAACGAGTTTTTCTAGCAGCTGGTGTAGCTATACTCTCGACGGCTATGCTAGCAGCGTGTTCAACAGGTGGTAA
AGATGCTACTAAACCTGTTACCTATACCTATGTCTTCTCTACAGATCCTACGACTCTGGATTATACAGTTTCTGGTAACA
AGAGTACAAAACAGGTCACAGGGAACGTTATTGACGGTCTACTTGAAAATGACCAATATGGGAATCTGATTCCATCAGTT
GCAGAAGATTGGACTGTTTCAAAAGATGGTTTGACCTATACCTATAAAATCCGTCAGGGTGTCAAATGGTATACCAATGA
AGGCGAAGAGTATGGTGAAGTCAAAGCTCAGGACTTTGTAACTGGTCTGAAGCACGCAGCTGATAAAAAATCACAGGCTC
TTTATCTGGTTCAAGACTCGGTTCAAGGTTTGGACGATTATGTCAATGGGAAAACAACAGATTTCTCTACTGTTGGTGTA
AAAGCGACAGATGATTATACGGTTGTTTACACTTTGAATCATCCAGAATCTTTCTGGAATTCTAAGACAACAATGGGCGT
TCTTGCCCCAATTAGCGAGGACTTTTTGGCTTCAAAAGGAGATGACTTTGGGAAGGCGACTGATGTAACAAGCATTCTTT
ATAATGGTGCCTATCTCCTCAAGGGATTGACATCTAAATCTTCCATTGAGATGACCAAAAATCAAAACTATTGGGATAAG
CAAAATGTCTTTATTGATGATATTAAATTGTCTTTCTTTGATGGTCAGGATGCCGATTCTCTTGGACGTGGCTTTGATGA
AGGACATTATCCAGCGGCACCTCTCTTTAAAAATTCTGCCAACTATGAACGTCTAAAAGAAAAGTACAAGGATAATATTG
TATATGGTCAACAAAGAGGTGGCGTATTCTATATGTCTACTAATATTGATCGTGTAGCTTATAACCATACTGCTAAAACA
AGTGATGTGGAAAAATCATCCACTAAAAAGGCTTTGTTGAATAAAGATTTCCGTCAATCCTTGGCTTTCGCTGCAGATCG
TACTGCTGCAGTATCTCAAGTATTTGGGGACGAAGTGGCACCTCGTAAATTACGTACAAGTTTTACCCCTCCAACATTTG
TCCAAGTTGGGGAGCAGTCGTTTGGGCAAGTAGCTAAGGCAGAACTGGATAAGTTGGATAGTGCTTGGAAAGACGTGAGT
CTTGATGATGCACAAGATTCACTTCATAATGTAGACAAGGCTAAAGCTAAATTTGAAGTTGCTAAGAAAACACTTCAAGC
CGATGGAGTACAGTTCCCCGTTCATTTAGACCTTCCAGTTTCCTCTACTCAGACAGATTTTATTCGTCAAGCCCAATCTT
ATAAACAATCCATTGAGGAAGCCTTAGGCTCTGAAAATATAGTGATTGACATTCAACAAGTTTCTGATGATGAATTGGGA
AATATGACAGTATTTGCAACATCAACTGACAATATTGATTGGGATATCAATGTAAATAGTGGTTGGAGTCCTGATTATGC
AGATCCATCAACCTATTTAGATGTATTTGATCCAACATCTGGCCCAACTCTTCTAGGAGCACTTGGTGTAGCACCAGGTA
CAGATAATCCGGCAATCAAATCTGTTGGTTTAGATAAGTTTAAAGAGTTAATTACGGATGCTAGTGGTGAGAAAACAGAT
CTGCAAAAACGTTATTCTAAATATGCTAAAGCTCAAGCTTGGTTAACAGATAGTGCCTTGGTTATTCCTGTATACTCAGA
TGGTGCCCAAATGCTAATAACGAAGAAAGTTCCAGGTAGCGGTGCAGATGGTTGGGTAGGTGATAAGACAAGTGAACACA
GCTACAAGTACCAAAAATTACAAGACAAGATTGTCACTTCTAAAGAAATGGATGACTTCCGCAAGAAATTTGCTGATGAA
AAAGCCAAATCAAATGCTGATTATCAGAAGAACTTAGACCGTCATATTCAAGAATAA

Domains

Predicted by InterproScan.

Bacterial extracellular solute-binding proteins, family 5 Middle (SBP_bac_5)

(76-517)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  amiA3 Streptococcus thermophilus LMD-9

53.788

100

0.54
  amiA Streptococcus salivarius strain HSISS4

53.718

100

0.538
  amiA3 Streptococcus thermophilus LMG 18311

53.333

100

0.535

Multiple sequence alignment