Detailed information NTG1170023

Bioinformatically predicted

Overview

• Name: amiA3
• Type: Regulator
• Locus tag: ACLV7Q_RS01865
• Genome accession: NZ_OZ217341
• Coordinates: 351537..353516 (+)
• Length: 659 a.a.
• NCBI ID: WP_218757337.1
• Uniprot ID: -
• Organism: Streptococcus mitis isolate S. mitis C22
• Function: binding to XIP (predicted from homology) Competence regulation

Related MGE

Note: This gene co-localizes with putative mobile genetic elements (MGEs) in the genome predicted by VRprofile2, as detailed below.

Gene-MGE association summary

MGE type	MGE coordinates	Gene coordinates	Relative position	Distance (bp)
IS/Tn	350153..351319	351537..353516	flank	218

Gene organization within MGE regions

Location: 350153..353516

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACLV7Q_RS01860 (SMIC22_03520)	-	350153..351319 (-)	1167	WP_218757336.1	IS30 family transposase	-
ACLV7Q_RS01865 (SMIC22_03530)	amiA3	351537..353516 (+)	1980	WP_218757337.1	peptide ABC transporter substrate-binding protein	Regulator

Sequence

Protein

• Length: 659 a.a.
• Molecular weight: 72516.61 Da
• Isoelectric Point: 4.7690

>NTDB_id=1170023 ACLV7Q_RS01865 WP_218757337.1 351537..353516(+) (amiA3) [Streptococcus mitis isolate S. mitis C22]
MKKSRVFATAGLVLLAAGVLAACSSSKSSDSSAPKAYGYIYTADPETLDYLISSKNSTKVVTSNGIDGLFTNDNYGNLTP
AVAEDWEVSKDGLTYTYKIRKGVKWFTSDGEEYAEVTAKDFVNGLKHAADKKSEAMYLAENSVKGLADYLSGTSTDFSTV
GVKAVDDYTLQYTLNQPEPFWNSKLTYSIFWPLNEEFETSKGSDFAKPTDPTSLLYNGPFLLKGLTAKSSVEFVKNEQYW
DKENVHLDTINLAYYDGSDQESLERNFTSGAYSFARLFPTSSNYSKVAEEYKDNIYYTQPDSGIAGIGVNIDRQSYNYTS
KTTDSEKASTKKALLNKDFRQALNFAFDRSAYSAQINGKDGAALAVRNLFVKPDFVSVGEKTFGDLVAAQLPAYGDEWKG
VNLADGQDGLFNADKAKAEFAKAKKTLEADGVQFPIHLDVPVDQAAKGYISRIQSFKQSVETVLGAENVVVDIQQMTRDE
FLNITYYAANASAEDWDVSGGVSWGPDYQDPSTYLDILKTTSSETTKTYLGFDNPNSPSVVQVGLKEYDKLVDEAAKETS
DLNVRYEKYAAAQAWLTDSSLFIPAMASAGAAPVLSRVVPFTGASAQTGSKGSDVYFKYLKLQDKAVTKKEYEKAREKWL
KEKAESNEKAQKELASHVK

Nucleotide

• Length: 1980 bp

>NTDB_id=1170023 ACLV7Q_RS01865 WP_218757337.1 351537..353516(+) (amiA3) [Streptococcus mitis isolate S. mitis C22]
ATGAAAAAAAGTCGTGTATTTGCTACAGCAGGTCTTGTTTTATTAGCAGCAGGTGTACTTGCAGCATGCAGTTCTTCAAA
ATCATCTGATTCATCAGCCCCTAAAGCTTATGGCTATATTTATACAGCAGACCCAGAAACCTTGGACTACCTGATTTCAA
GTAAAAATAGTACAAAAGTAGTGACTTCAAATGGGATTGATGGTTTATTTACTAATGATAATTACGGAAATCTTACCCCT
GCAGTGGCAGAGGATTGGGAAGTCTCTAAGGATGGTTTGACCTACACTTATAAGATTCGTAAAGGGGTTAAATGGTTTAC
CTCGGATGGAGAAGAATATGCAGAGGTGACGGCTAAAGATTTCGTGAACGGTTTAAAACACGCAGCAGATAAAAAATCAG
AAGCTATGTATTTAGCTGAAAATTCGGTTAAAGGCTTGGCAGATTATCTATCAGGAACTTCAACAGATTTTTCAACAGTT
GGTGTCAAGGCGGTTGATGATTATACGTTACAATACACTTTGAACCAGCCTGAACCGTTCTGGAACTCTAAGTTGACCTA
TTCTATTTTCTGGCCTCTGAATGAAGAATTCGAAACATCAAAAGGAAGCGATTTTGCTAAACCAACAGATCCGACATCCT
TGCTTTATAATGGGCCATTCTTGTTGAAAGGGTTGACTGCAAAATCTTCTGTAGAGTTTGTAAAAAATGAACAATATTGG
GACAAAGAAAACGTCCACCTAGATACTATAAATCTGGCTTACTATGATGGCTCAGATCAGGAGTCGCTAGAGCGTAACTT
CACTAGTGGAGCTTATAGTTTTGCTCGTCTTTTCCCTACCAGTTCCAACTACTCTAAGGTTGCAGAAGAATACAAGGACA
ATATCTATTACACACAACCAGACTCTGGGATTGCTGGTATAGGTGTGAATATTGATCGCCAAAGTTACAACTATACTTCT
AAAACTACCGATTCAGAGAAAGCCTCTACTAAGAAGGCATTGCTTAACAAAGATTTCCGTCAAGCCTTGAATTTTGCTTT
TGATCGCTCAGCTTACTCTGCTCAAATCAATGGTAAAGATGGAGCAGCTTTAGCAGTTCGTAATTTATTTGTAAAACCAG
ACTTTGTTTCAGTTGGTGAGAAGACCTTTGGTGATTTAGTCGCTGCTCAACTTCCTGCCTATGGAGATGAGTGGAAAGGT
GTGAATTTAGCTGATGGGCAGGATGGTTTATTCAATGCTGACAAGGCCAAGGCAGAATTTGCAAAAGCTAAGAAAACTTT
AGAAGCAGACGGCGTTCAGTTCCCTATTCATTTGGATGTTCCAGTAGACCAAGCAGCAAAAGGCTACATATCCCGTATTC
AGTCCTTTAAACAATCTGTAGAAACAGTTCTTGGTGCTGAAAATGTCGTGGTTGATATTCAACAAATGACAAGAGATGAA
TTTCTTAATATCACTTACTATGCTGCTAATGCGTCAGCTGAGGATTGGGATGTATCGGGAGGAGTTTCATGGGGGCCAGA
CTATCAAGACCCATCTACTTACCTGGATATTTTAAAAACAACTAGCAGTGAAACTACAAAAACATATTTAGGATTTGATA
ATCCAAATAGCCCTTCAGTAGTTCAAGTTGGTTTGAAAGAATACGATAAATTAGTTGATGAAGCTGCCAAAGAGACAAGC
GACTTGAATGTCCGTTATGAAAAATATGCAGCGGCTCAAGCATGGTTGACAGATAGTTCACTCTTTATTCCTGCTATGGC
TTCTGCTGGTGCAGCACCGGTGCTTTCACGAGTTGTTCCATTTACTGGAGCTTCTGCGCAAACAGGCTCTAAGGGGTCAG
ATGTTTACTTCAAATATTTGAAATTACAAGATAAAGCGGTGACTAAGAAAGAGTATGAAAAAGCTCGTGAAAAATGGTTG
AAAGAAAAAGCTGAATCAAATGAGAAAGCTCAAAAAGAATTGGCAAGTCATGTGAAGTAA

Domains

Predicted by InterproScan.

• Bacterial extracellular solute-binding proteins, family 5 Middle (SBP_bac_5) (78-522)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
amiA3	Streptococcus thermophilus LMD-9	67.273	100	0.674
amiA3	Streptococcus thermophilus LMG 18311	67.121	100	0.672
amiA	Streptococcus salivarius strain HSISS4	67.071	100	0.671