Detailed information    

insolico Bioinformatically predicted

Overview

Name   comM   Type   Regulator
Locus tag   ACLV7Q_RS01515 Genome accession   NZ_OZ217341
Coordinates   287601..288221 (+) Length   206 a.a.
NCBI ID   WP_049532500.1    Uniprot ID   -
Organism   Streptococcus mitis isolate S. mitis C22     
Function   fratricide immunity (predicted from homology)   
Competence regulation

Genomic Context

Location: 282601..293221
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACLV7Q_RS01490 ndk 282781..283194 (+) 414 WP_218757231.1 nucleoside-diphosphate kinase -
  ACLV7Q_RS01495 (SMIC22_02860) cbpJ 283418..284338 (-) 921 WP_218757212.1 choline-binding protein CbpJ -
  ACLV7Q_RS01500 (SMIC22_02870) - 284357..285298 (-) 942 WP_411866014.1 trypsin-like peptidase domain-containing protein -
  ACLV7Q_RS01505 - 286076..286246 (-) 171 Protein_262 PhrA family quorum-sensing system peptide -
  ACLV7Q_RS01510 (SMIC22_02880) - 286433..287296 (+) 864 WP_218757210.1 helix-turn-helix domain-containing protein -
  ACLV7Q_RS01515 (SMIC22_02890) comM 287601..288221 (+) 621 WP_049532500.1 hypothetical protein Regulator
  ACLV7Q_RS01520 (SMIC22_02900) tsaE 288412..288855 (+) 444 WP_218757209.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE -
  ACLV7Q_RS01525 (SMIC22_02910) - 288845..289363 (+) 519 WP_218757208.1 GNAT family N-acetyltransferase -
  ACLV7Q_RS01530 (SMIC22_02920) brpA 289371..290387 (+) 1017 WP_218757207.1 biofilm formation/cell division transcriptional regulator BrpA -
  ACLV7Q_RS01535 (SMIC22_02930) cinA 290471..291727 (+) 1257 WP_218757206.1 competence/damage-inducible protein A Machinery gene
  ACLV7Q_RS01540 (SMIC22_02940) recA 291782..292948 (+) 1167 WP_050234077.1 recombinase RecA Machinery gene

Sequence

Protein


Download         Length: 206 a.a.        Molecular weight: 23504.63 Da        Isoelectric Point: 10.0254

>NTDB_id=1170016 ACLV7Q_RS01515 WP_049532500.1 287601..288221(+) (comM) [Streptococcus mitis isolate S. mitis C22]
MKSMRILFLLALIQISLSSCFLWKECILSFKQSTAFFIGSMVFVSGICAGVNYLYTRKQEVHSVLASKQSVKLFYSILLL
INLLGAVLVLSDNLFIKNTLQQELVDFLLPSFFFLFGLDLLIFLPLKKYMRDLLAMLDRKKTVLVTILATLLFLRNPMTI
VSLLIYIGLGLFFAAYLVPNSVKKEVSFYGHIFRDLVLVIATLIFF

Nucleotide


Download         Length: 621 bp        

>NTDB_id=1170016 ACLV7Q_RS01515 WP_049532500.1 287601..288221(+) (comM) [Streptococcus mitis isolate S. mitis C22]
ATGAAATCAATGAGAATCTTATTTTTGTTAGCTTTAATTCAAATCAGTTTGAGTAGCTGTTTCCTATGGAAAGAATGCAT
CTTGTCCTTTAAACAAAGTACAGCTTTTTTCATCGGAAGTATGGTCTTCGTTTCAGGAATCTGTGCTGGAGTAAATTATC
TTTATACCCGTAAGCAAGAAGTCCATAGTGTCCTAGCCAGTAAGCAGTCAGTGAAGCTTTTTTACAGTATCTTGCTCTTA
ATTAACTTGTTAGGAGCTGTTCTTGTCCTGTCAGATAACTTGTTCATCAAAAATACGCTGCAGCAAGAATTAGTTGACTT
TTTATTGCCATCCTTTTTCTTTCTATTTGGGCTAGATTTGTTGATTTTTTTACCCTTGAAAAAATACATGCGTGATTTGC
TTGCTATGCTAGATAGAAAAAAGACAGTGTTGGTGACTATTTTAGCAACACTTCTCTTCTTAAGAAATCCAATGACCATT
GTCTCTCTTTTGATTTATATTGGACTGGGCTTGTTTTTTGCAGCCTACCTTGTCCCAAATTCTGTTAAAAAGGAAGTTTC
CTTTTATGGTCATATTTTCCGAGATCTTGTATTGGTCATTGCTACGCTCATTTTCTTTTAG

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comM Streptococcus pneumoniae D39

97.573

100

0.976
  comM Streptococcus pneumoniae R6

97.573

100

0.976
  comM Streptococcus pneumoniae TIGR4

97.573

100

0.976
  comM Streptococcus mitis SK321

38.462

94.66

0.364

Multiple sequence alignment