Detailed information    

insolico Bioinformatically predicted

Overview

Name   amiA   Type   Regulator
Locus tag   ACLV7H_RS03335 Genome accession   NZ_OZ217340
Coordinates   616584..618542 (+) Length   652 a.a.
NCBI ID   WP_045592213.1    Uniprot ID   -
Organism   Streptococcus oralis isolate S. oralis A22     
Function   internalize XIP (predicted from homology)   
Competence regulation

Genomic Context

Location: 611584..623542
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACLV7H_RS03310 (SORA22_06580) - 611722..612234 (+) 513 WP_045592224.1 YiiX/YebB-like N1pC/P60 family cysteine hydrolase -
  ACLV7H_RS03315 (SORA22_06590) - 612218..612868 (+) 651 WP_045592221.1 DUF1803 domain-containing protein -
  ACLV7H_RS03320 (SORA22_06600) - 612977..613177 (+) 201 WP_045592219.1 CsbD family protein -
  ACLV7H_RS03325 (SORA22_06610) - 613209..614654 (-) 1446 WP_045592216.1 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--L- lysine ligase -
  ACLV7H_RS03330 (SORA22_06620) - 614760..616382 (+) 1623 WP_411866356.1 oligosaccharide flippase family protein -
  ACLV7H_RS03335 (SORA22_06630) amiA 616584..618542 (+) 1959 WP_045592213.1 peptide ABC transporter substrate-binding protein Regulator
  ACLV7H_RS03340 (SORA22_06640) - 618688..619782 (+) 1095 WP_411866357.1 cystathionine gamma-synthase -
  ACLV7H_RS03345 (SORA22_06650) - 619790..620956 (+) 1167 WP_411866358.1 MalY/PatB family protein -

Sequence

Protein


Download         Length: 652 a.a.        Molecular weight: 72804.92 Da        Isoelectric Point: 4.7326

>NTDB_id=1169953 ACLV7H_RS03335 WP_045592213.1 616584..618542(+) (amiA) [Streptococcus oralis isolate S. oralis A22]
MKKSKAKYLTLASVVLSAGILLSACGNSSSASKTYNYVYSSDPSSLNYLAENRATTNDIVTNLVDGLMENDQYGNYVPSL
AEDWTVSQDGLIYTYKLRKDAKWYTYEGEEYAPVTAQDFVTGLKYAADKKSEALYLVQDSVAGLDDYINGKTTDFSTVGV
KAIDDQTVQYTLTRPEPYWNSKTTSTILFPVNADFLKSKGDDFGKVDPSSILYSGPFLMKSFVSKSVIEYKKNPNYWDAK
NVFVDDVKLTYYDGSDQDALARNFVEGVYSYARLYPNSSSFEGIKEKNKDNIIYSMQNATSYYLNFNLDRKSYNFTSKSS
DIEKKSTQEAVLNKNFRQAFNYAYNRTAYGAQSQGEEGATKIIRNLVVPPTFVSINGKDFGDVVSEKMVNYGQEWQGINF
ADAQDPYYNPDKAKAKFAEAKKELEAKGVQFPIHLDVSVDQSAKKGVLEASSLKQSIESVLGAENVVIDIQQLSTDDYDN
SGYLAQTAAQKDFDIYNGGWSADYLDPSSYLDILNVNNGGMLQNLGLEPGEVNDKAKAVGLDTYTQMLEEANKEQDPAKR
YEKYAEVQAWLVDSALAIPNVSQGGTPGLRKTVPFSAPFSQAGNKGVESYKYLKLQDKTVTTDEYEKAKEKWQKEKEESN
KKAQEELAKHVK

Nucleotide


Download         Length: 1959 bp        

>NTDB_id=1169953 ACLV7H_RS03335 WP_045592213.1 616584..618542(+) (amiA) [Streptococcus oralis isolate S. oralis A22]
ATGAAAAAGTCTAAGGCCAAGTATCTGACACTTGCAAGTGTCGTGTTAAGCGCAGGTATTCTACTGAGCGCATGTGGAAA
CTCAAGTAGCGCTTCTAAAACATATAACTATGTTTATTCGAGCGATCCATCTAGTTTGAACTATCTTGCTGAAAACCGTG
CAACAACCAACGACATCGTTACTAATTTGGTAGATGGATTGATGGAAAATGACCAATACGGTAACTATGTTCCATCGTTG
GCAGAGGATTGGACTGTTTCTCAGGACGGTTTGATCTATACTTACAAATTGCGTAAGGATGCAAAATGGTATACCTATGA
GGGTGAAGAATACGCCCCTGTAACGGCGCAAGATTTTGTCACTGGGTTGAAATATGCTGCTGATAAAAAATCCGAAGCCT
TGTACCTAGTTCAAGACTCTGTAGCAGGTTTGGATGACTATATCAACGGTAAAACAACTGACTTTTCAACTGTCGGTGTT
AAGGCGATTGACGACCAAACAGTTCAGTACACTTTGACACGTCCAGAACCTTATTGGAATTCTAAAACAACTTCAACCAT
TCTCTTCCCTGTCAATGCAGATTTCTTAAAATCAAAAGGGGATGACTTTGGTAAGGTAGATCCTTCTAGCATTTTGTACA
GTGGACCTTTCTTGATGAAATCGTTTGTTTCAAAATCTGTTATCGAATACAAGAAAAATCCAAATTACTGGGATGCTAAA
AATGTCTTTGTGGATGATGTGAAATTGACTTACTATGACGGCAGTGACCAAGATGCACTAGCTCGTAACTTCGTAGAAGG
AGTCTACAGCTACGCGCGTCTCTACCCAAATAGCTCAAGCTTTGAAGGAATTAAAGAGAAGAACAAGGATAACATCATCT
ATAGTATGCAAAACGCAACTTCTTATTACTTGAACTTCAACTTGGACAGAAAATCTTATAACTTCACTTCTAAATCCTCA
GATATCGAAAAGAAATCAACCCAAGAAGCAGTTCTGAATAAAAACTTCCGTCAAGCCTTCAACTATGCTTACAACCGTAC
AGCTTATGGAGCACAATCTCAAGGGGAAGAAGGAGCAACAAAGATTATTCGTAACTTGGTTGTACCTCCAACATTTGTAA
GTATCAACGGAAAAGACTTTGGAGATGTTGTTTCAGAAAAGATGGTCAACTATGGCCAAGAATGGCAAGGAATCAATTTT
GCAGATGCGCAAGACCCATACTACAATCCTGATAAGGCCAAGGCTAAATTTGCGGAAGCCAAGAAAGAATTGGAAGCTAA
GGGTGTGCAATTCCCAATCCACTTGGATGTATCAGTTGACCAATCAGCTAAAAAAGGTGTTCTTGAAGCGAGCTCTTTGA
AACAATCCATCGAATCTGTTCTCGGAGCTGAGAATGTGGTTATCGATATCCAACAATTATCAACAGATGACTACGATAAT
TCTGGCTACCTCGCTCAAACAGCAGCTCAAAAAGACTTTGATATCTATAATGGTGGTTGGAGTGCTGACTACTTGGATCC
ATCAAGCTATCTTGATATCTTAAATGTCAATAACGGTGGTATGTTGCAAAACCTTGGTCTAGAACCAGGTGAGGTCAATG
ACAAGGCTAAGGCTGTTGGTCTGGATACTTACACTCAAATGTTGGAAGAAGCTAATAAAGAGCAAGACCCAGCAAAACGT
TATGAAAAATATGCTGAAGTTCAAGCTTGGCTCGTTGATAGCGCCCTTGCAATTCCAAACGTTTCCCAAGGTGGAACACC
TGGCTTGAGAAAGACAGTTCCATTCTCAGCGCCATTCTCACAAGCTGGAAATAAGGGTGTCGAATCATACAAATATCTCA
AGTTGCAAGATAAGACTGTAACGACTGATGAGTATGAAAAAGCTAAAGAAAAATGGCAGAAAGAAAAAGAAGAATCAAAT
AAAAAAGCCCAAGAAGAACTGGCAAAACACGTTAAATAA

Domains

Predicted by InterproScan.

Bacterial extracellular solute-binding proteins, family 5 Middle (SBP_bac_5)

(76-519)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  amiA Streptococcus salivarius strain HSISS4

56.079

100

0.566
  amiA3 Streptococcus thermophilus LMG 18311

55.842

100

0.564
  amiA3 Streptococcus thermophilus LMD-9

55.539

100

0.561

Multiple sequence alignment