Detailed information    

insolico Bioinformatically predicted

Overview

Name   dsbA1   Type   Machinery gene
Locus tag   ACH8EK_RS09505 Genome accession   NZ_OZ197910
Coordinates   1828875..1829519 (-) Length   214 a.a.
NCBI ID   WP_003689466.1    Uniprot ID   Q5F6K3
Organism   Neisseria gonorrhoeae isolate SGC-24-001     
Function   DNA binding and uptake; interact with PilQ (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 1823875..1834519
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACH8EK_RS09470 ftsL 1824356..1824619 (-) 264 WP_003701583.1 cell division protein FtsL -
  ACH8EK_RS09475 rsmH 1824646..1825602 (-) 957 WP_003689462.1 16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH -
  ACH8EK_RS09480 mraZ 1825599..1826054 (-) 456 WP_003689463.1 division/cell wall cluster transcriptional repressor MraZ -
  ACH8EK_RS09485 - 1826333..1827580 (+) 1248 WP_010951292.1 class I SAM-dependent methyltransferase -
  ACH8EK_RS09500 - 1828021..1828842 (-) 822 WP_003689465.1 undecaprenyl-diphosphate phosphatase -
  ACH8EK_RS09505 dsbA1 1828875..1829519 (-) 645 WP_003689466.1 thiol:disulfide interchange protein DsbA/DsbL Machinery gene
  ACH8EK_RS09510 ftsN 1829522..1830385 (-) 864 WP_010360712.1 cell division protein FtsN -
  ACH8EK_RS09515 comM 1830491..1831987 (-) 1497 WP_003689469.1 YifB family Mg chelatase-like AAA ATPase Machinery gene
  ACH8EK_RS09520 - 1832001..1832321 (-) 321 WP_002216505.1 accessory factor UbiK family protein -
  ACH8EK_RS09525 - 1832376..1832543 (+) 168 WP_395372480.1 hypothetical protein -
  ACH8EK_RS09530 putP 1832809..1834335 (+) 1527 WP_003689473.1 sodium/proline symporter PutP -

Sequence

Protein


Download         Length: 214 a.a.        Molecular weight: 24003.07 Da        Isoelectric Point: 9.9225

>NTDB_id=1169731 ACH8EK_RS09505 WP_003689466.1 1828875..1829519(-) (dsbA1) [Neisseria gonorrhoeae isolate SGC-24-001]
MKFKHLLPLLLSAVLSAQAYALTEGEDYLVLDKPIPQEQPGKIEVLEFFGYFCVHCHHFDPLLLKLGKALPSDTYLRTEH
VVWRPEMLGLARMAAAVKLSGLKYQANSAVFKAVYEQKIRLENRAVAGKWALSQKGFDGKKLMRAYDSPEAAAVALKMQK
LTEQYGIDSTPTVIVGGKYRVIFNNGFDGGVHTIKELVAKVREERKRQTPAVQK

Nucleotide


Download         Length: 645 bp        

>NTDB_id=1169731 ACH8EK_RS09505 WP_003689466.1 1828875..1829519(-) (dsbA1) [Neisseria gonorrhoeae isolate SGC-24-001]
ATGAAGTTTAAACATCTGTTGCCGCTGCTGCTGTCGGCAGTGTTGTCCGCGCAGGCATATGCCCTGACGGAAGGGGAAGA
CTATCTTGTGTTGGATAAACCCATTCCTCAAGAACAGCCGGGAAAAATTGAGGTTTTGGAATTTTTCGGCTATTTTTGCG
TACATTGCCATCATTTCGATCCTTTGTTATTGAAACTGGGCAAGGCATTGCCGTCTGATACTTATCTGCGGACGGAGCAC
GTGGTCTGGCGGCCTGAAATGCTCGGTCTGGCAAGAATGGCTGCTGCGGTCAAGCTGTCGGGTTTGAAATATCAGGCAAA
CTCTGCTGTGTTTAAAGCAGTTTACGAACAAAAAATCCGTTTGGAAAACAGGGCTGTTGCCGGAAAATGGGCTTTATCTC
AAAAAGGTTTTGACGGCAAAAAACTGATGCGCGCCTATGATTCCCCCGAAGCTGCCGCCGTCGCATTAAAAATGCAGAAA
CTGACGGAACAATACGGTATTGACAGCACGCCGACCGTTATTGTCGGCGGAAAATACCGCGTTATCTTCAATAATGGCTT
TGATGGCGGCGTTCATACGATTAAAGAATTGGTTGCCAAAGTCAGGGAAGAACGCAAGCGTCAGACCCCTGCTGTACAGA
AATAG

Domains

Predicted by InterproScan.

Thioredoxin (Thioredoxin_4)

(42-179)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB Q5F6K3

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  dsbA1 Neisseria meningitidis MC58

57.219

87.383

0.5
  dsbA2 Neisseria meningitidis MC58

52.688

86.916

0.458

Multiple sequence alignment