Detailed information    

insolico Bioinformatically predicted

Overview


Name   comA/comEC   Type   Machinery gene
Locus tag   ACNUEH_RS17660 Genome accession   NZ_OZ197095
Coordinates   3678923..3681355 (-) Length   810 a.a.
NCBI ID   WP_057066232.1    Uniprot ID   -
Organism   Acinetobacter baumannii isolate 23S01404-6     
Function   ssDNA transport through the inner membrane (predicted from homology)   
DNA binding and uptake

Genomic Context


Location: 3673923..3686355
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACNUEH_RS17635 purM 3674246..3675316 (+) 1071 WP_000071984.1 phosphoribosylformylglycinamidine cyclo-ligase -
  ACNUEH_RS17640 purN 3675313..3675942 (+) 630 WP_000975533.1 phosphoribosylglycinamide formyltransferase -
  ACNUEH_RS17645 - 3676006..3676815 (-) 810 WP_000114071.1 alpha/beta fold hydrolase -
  ACNUEH_RS17650 sppA 3676834..3677850 (-) 1017 WP_001286615.1 signal peptide peptidase SppA -
  ACNUEH_RS17655 - 3677987..3678970 (+) 984 WP_024436189.1 lysophospholipid acyltransferase family protein -
  ACNUEH_RS17660 comA/comEC 3678923..3681355 (-) 2433 WP_057066232.1 DNA internalization-related competence protein ComEC/Rec2 Machinery gene
  ACNUEH_RS17665 lolD 3681441..3682127 (-) 687 WP_032058272.1 lipoprotein-releasing ABC transporter ATP-binding protein LolD -
  ACNUEH_RS17670 - 3682120..3683355 (-) 1236 WP_001984636.1 lipoprotein-releasing ABC transporter permease subunit -
  ACNUEH_RS17675 - 3683493..3683573 (+) 81 Protein_3443 PilZ domain-containing protein -
  ACNUEH_RS17680 - 3683603..3684511 (-) 909 WP_057063899.1 DMT family transporter -
  ACNUEH_RS17685 - 3684522..3685007 (-) 486 WP_085944104.1 YaiI/YqxD family protein -
  ACNUEH_RS17690 - 3685264..3686205 (+) 942 WP_000795874.1 hypothetical protein -

Sequence


Protein


Download         Length: 810 a.a.        Molecular weight: 92516.89 Da        Isoelectric Point: 8.7582

>NTDB_id=1169462 ACNUEH_RS17660 WP_057066232.1 3678923..3681355(-) (comA/comEC) [Acinetobacter baumannii isolate 23S01404-6]
MFKIILLGWIGGIALMGIDFPLIMQYEKVGEALLLLAFIFYLYKRPMFVDRPFLKAVFCLLCTTSLFMVGYYYAEKALIE
RLEQRETDTRNLDIIVYINRLSEEKDNKVQQTAQILNLSKEPVNWLLYLKSNNQNLLKNNQNLELGHYYRISGKTRPAHS
YATPGAFDQEKWFIQRNIMSGFNVRYIEPLSLDEIYRLGYQQHLKEQQSFSNSFRLNIEKLRLTFRQILNSSSLQQKGLI
LALLTGDESLLSDETQLQFKQLGISHLLAISGPHVLIFAIMLSWACHQFISRYYPQIYLWKPKQVLMAVPCCLGVLIYTA
FVGFEIPALRTLLSTLIFIGFLLFKQPIKPFTLLVYSASLLLLIDPFSVLSAGFWLSYGACFILLRIYQTIAQLPEQHFL
SLSSKMIFMSKVLIEPQGKIFIALSPLTLLFFQQISWVAPLTNIIAVPIVGGVIVPLNIIAACAWFIVKPFGNMLFHFND
MLLSILLSCLGLLEKLSLPLQGISLTPLSLLAISCAIIILFLPKGILPKTWGILCCLPLVIMNKTSQQIQLNILDVGQGQ
AIFLQHSEQNWLIDTGGSYDEKIFSIGQNVVVPFLRQQGVRQLDHVVLSHLDQDHSGAFPLIQQEIPVKQLISNEQLPNY
LKQPFQYCHQGQQWHYPELDIQILWPKEKDLAFVASNQNQYSCVVYLQFKKVGGYQNFLIMGDAGWEAEYELLKDYPNLK
IDVLVLGHHGSKHSSAYDFLATLKPKLAIASAGFDNRYGHPSQQVIARLKALRIPLKSTVEQGTLSFVLENHKLVLHDRR
LDRLWLSRGF

Nucleotide


Download         Length: 2433 bp        

>NTDB_id=1169462 ACNUEH_RS17660 WP_057066232.1 3678923..3681355(-) (comA/comEC) [Acinetobacter baumannii isolate 23S01404-6]
ATGTTTAAGATTATTCTATTGGGGTGGATTGGCGGTATTGCATTGATGGGAATAGATTTCCCTTTAATCATGCAATATGA
AAAAGTGGGCGAGGCTCTACTGTTACTTGCCTTTATTTTTTATCTTTATAAACGCCCCATGTTCGTTGATCGACCATTTT
TAAAGGCAGTGTTTTGCTTATTATGTACAACAAGTCTTTTTATGGTTGGTTACTACTATGCTGAAAAAGCACTGATTGAA
CGATTAGAACAAAGAGAAACAGATACCCGAAATCTCGACATTATTGTTTATATAAACCGTTTAAGTGAAGAAAAAGATAA
TAAGGTTCAACAAACTGCACAAATTTTAAATCTTTCTAAAGAACCGGTAAATTGGTTGCTATATTTAAAAAGTAATAATC
AAAATTTATTAAAGAATAATCAGAATCTTGAATTAGGTCACTATTATCGAATATCTGGAAAAACAAGACCTGCGCATAGT
TATGCCACCCCAGGAGCTTTTGATCAGGAAAAGTGGTTTATTCAGCGAAATATTATGTCTGGTTTTAACGTGAGATATAT
TGAGCCTTTAAGCCTTGATGAAATCTATCGATTAGGCTATCAGCAACATTTAAAAGAACAACAGTCTTTTTCCAATAGTT
TTCGTTTAAATATAGAAAAACTTCGCTTAACTTTTAGGCAAATATTAAACAGCTCATCTCTACAGCAAAAGGGTTTAATT
TTAGCTTTGCTGACAGGTGATGAAAGCCTTTTATCAGATGAAACTCAACTACAGTTCAAACAATTAGGAATTAGTCATTT
ATTGGCGATCTCAGGCCCACATGTGCTCATTTTTGCCATTATGTTATCTTGGGCATGTCATCAATTTATCAGTCGTTATT
ATCCTCAAATTTACTTATGGAAACCGAAACAGGTTTTGATGGCTGTACCATGCTGCCTTGGTGTTTTAATTTATACTGCA
TTTGTAGGTTTCGAAATTCCTGCACTACGAACATTATTATCAACCCTTATATTTATTGGATTTCTATTATTTAAACAACC
TATTAAACCTTTTACATTACTCGTATATAGCGCAAGTCTACTGTTGCTAATTGACCCGTTTAGTGTGCTTTCTGCAGGTT
TTTGGCTGTCTTATGGGGCATGCTTTATTTTATTAAGAATTTACCAAACTATAGCGCAGCTACCTGAGCAACATTTTTTA
AGTCTGAGCTCAAAAATGATTTTTATGAGTAAGGTGTTAATTGAGCCTCAAGGCAAAATATTTATTGCATTGAGTCCCTT
AACCTTACTTTTCTTTCAACAAATTTCTTGGGTTGCTCCATTAACCAATATTATTGCCGTGCCTATTGTTGGTGGTGTTA
TTGTCCCTTTAAACATCATAGCTGCTTGCGCATGGTTTATAGTAAAACCATTTGGAAATATGCTTTTTCATTTCAATGAT
ATGTTGCTCAGCATATTGCTGAGTTGTTTGGGCTTATTAGAAAAACTTTCTTTACCATTACAAGGTATAAGCTTGACGCC
ACTGTCTTTATTGGCGATTAGCTGTGCCATTATTATTTTATTTTTACCTAAAGGAATTCTGCCCAAAACTTGGGGGATAT
TATGTTGTTTACCCTTAGTTATTATGAACAAAACGAGTCAGCAAATTCAGCTTAATATTTTAGATGTTGGGCAGGGGCAG
GCCATTTTTTTACAACATTCCGAACAAAACTGGTTAATTGACACAGGCGGTTCTTACGATGAAAAAATATTTAGTATTGG
ACAAAATGTTGTAGTGCCTTTTCTACGTCAGCAAGGCGTAAGACAATTAGATCATGTTGTGCTATCCCATCTTGATCAAG
ACCATAGTGGTGCGTTTCCTCTTATTCAACAAGAGATTCCTGTAAAGCAGCTTATTTCGAATGAACAATTACCAAATTAT
TTAAAGCAACCATTCCAATATTGCCATCAAGGGCAACAATGGCATTATCCTGAGTTAGATATTCAAATTTTATGGCCTAA
AGAAAAAGATTTGGCTTTTGTTGCTTCTAACCAGAATCAATATTCTTGTGTTGTATACCTTCAATTTAAAAAAGTTGGTG
GTTACCAAAATTTTCTTATTATGGGCGATGCAGGATGGGAAGCTGAATACGAGTTATTAAAAGATTATCCTAACTTGAAG
ATAGATGTGTTGGTGCTAGGGCATCATGGAAGTAAGCACAGTTCGGCTTATGATTTCTTGGCGACCTTAAAACCTAAACT
GGCTATTGCATCGGCAGGGTTTGATAACCGTTATGGCCATCCTAGCCAACAAGTTATAGCACGTTTAAAAGCTCTACGTA
TTCCGCTAAAAAGCACTGTGGAACAAGGAACCTTAAGTTTTGTGCTGGAAAACCACAAATTAGTTTTACATGACCGACGT
TTGGATAGGCTCTGGTTGAGTAGAGGTTTTTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comA/comEC Acinetobacter baumannii D1279779

97.654

100

0.977

  comA/comEC Acinetobacter baumannii strain A118

97.284

100

0.973

  comA/comEC Acinetobacter baylyi ADP1

49.692

100

0.498


Multiple sequence alignment