Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   ACNUEH_RS00625 Genome accession   NZ_OZ197095
Coordinates   137458..137841 (-) Length   127 a.a.
NCBI ID   WP_024438036.1    Uniprot ID   -
Organism   Acinetobacter baumannii isolate 23S01404-6     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 132458..142841
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACNUEH_RS00610 - 134351..136429 (-) 2079 WP_024438034.1 methyl-accepting chemotaxis protein -
  ACNUEH_RS00615 - 136476..137011 (-) 536 Protein_115 chemotaxis protein CheW -
  ACNUEH_RS00620 - 137072..137434 (-) 363 WP_000101096.1 response regulator -
  ACNUEH_RS00625 pilG 137458..137841 (-) 384 WP_024438036.1 twitching motility response regulator PilG Regulator
  ACNUEH_RS00630 - 138124..138762 (+) 639 WP_002027721.1 hypothetical protein -
  ACNUEH_RS00635 - 138822..139940 (+) 1119 WP_057065445.1 efflux RND transporter periplasmic adaptor subunit -

Sequence

Protein


Download         Length: 127 a.a.        Molecular weight: 14181.18 Da        Isoelectric Point: 4.5746

>NTDB_id=1169423 ACNUEH_RS00625 WP_024438036.1 137458..137841(-) (pilG) [Acinetobacter baumannii isolate 23S01404-6]
MEDAFQNLKVMVIDDSKTIRRTAETLLQREGCEVITAVDGFEALSKIAEANPDIVFVDIMMPRLDGYQTCALIKNSQNYQ
NIPVIMLSSKDGLFDQAKGHVVGSDEYLTKPFSKDELLNAIRNHVSS

Nucleotide


Download         Length: 384 bp        

>NTDB_id=1169423 ACNUEH_RS00625 WP_024438036.1 137458..137841(-) (pilG) [Acinetobacter baumannii isolate 23S01404-6]
ATGGAAGATGCATTCCAAAATCTGAAAGTAATGGTTATTGATGACTCAAAAACTATACGCCGTACCGCAGAAACTCTATT
GCAACGCGAAGGTTGCGAAGTGATTACTGCTGTCGATGGATTTGAAGCTTTATCTAAAATTGCTGAAGCGAATCCGGATA
TTGTTTTTGTAGATATCATGATGCCTCGTTTAGACGGTTATCAAACTTGTGCTCTGATTAAGAACTCTCAAAATTATCAG
AACATTCCCGTTATCATGCTCTCTAGTAAAGATGGTTTATTTGATCAGGCAAAAGGGCATGTGGTAGGTTCAGATGAATA
CTTGACGAAACCTTTTAGCAAAGATGAATTGCTAAATGCGATTCGTAATCATGTAAGTTCATAA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(10-122)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

99.213

100

0.992
  vicR Streptococcus mutans UA159

42.735

92.126

0.394
  pilH Synechocystis sp. PCC 6803

41.593

88.976

0.37

Multiple sequence alignment