Detailed information    

insolico Bioinformatically predicted

Overview


Name   comP   Type   Regulator
Locus tag   AB3Y92_RS15120 Genome accession   NZ_OZ061327
Coordinates   2895969..2898284 (-) Length   771 a.a.
NCBI ID   WP_144461870.1    Uniprot ID   -
Organism   Bacillus pumilus isolate Bacillus pumilus CIRM-BIA2784     
Function   phosphorylation of ComA (predicted from homology)   
Competence regulation

Genomic Context


Location: 2890969..2903284
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AB3Y92_RS15080 - 2891378..2891809 (+) 432 WP_034620105.1 Na(+)/H(+) antiporter subunit B -
  AB3Y92_RS15085 - 2891809..2892150 (+) 342 WP_058013796.1 Na(+)/H(+) antiporter subunit C -
  AB3Y92_RS15090 - 2892143..2893621 (+) 1479 WP_058013795.1 Na+/H+ antiporter subunit D -
  AB3Y92_RS15095 - 2893628..2894107 (+) 480 WP_058013794.1 Na+/H+ antiporter subunit E -
  AB3Y92_RS15100 - 2894107..2894388 (+) 282 WP_012011105.1 Na(+)/H(+) antiporter subunit F1 -
  AB3Y92_RS15105 mnhG 2894372..2894746 (+) 375 WP_003213369.1 monovalent cation/H(+) antiporter subunit G -
  AB3Y92_RS15110 - 2894834..2895223 (-) 390 WP_003213775.1 hotdog fold thioesterase -
  AB3Y92_RS15115 comA 2895247..2895888 (-) 642 WP_058013793.1 response regulator transcription factor Regulator
  AB3Y92_RS15120 comP 2895969..2898284 (-) 2316 WP_144461870.1 ATP-binding protein Regulator
  AB3Y92_RS15125 comX 2898342..2898509 (-) 168 WP_081042274.1 competence pheromone ComX -
  AB3Y92_RS15130 - 2898506..2899420 (-) 915 WP_061409480.1 polyprenyl synthetase family protein -
  AB3Y92_RS15135 degQ 2899572..2899712 (-) 141 WP_003213123.1 degradation enzyme regulation protein DegQ Regulator
  AB3Y92_RS15140 - 2900218..2900571 (+) 354 WP_058013790.1 hypothetical protein -
  AB3Y92_RS15145 - 2900603..2901829 (-) 1227 WP_012011110.1 EAL and HDOD domain-containing protein -

Sequence


Protein


Download         Length: 771 a.a.        Molecular weight: 89492.12 Da        Isoelectric Point: 8.3307

>NTDB_id=1165927 AB3Y92_RS15120 WP_144461870.1 2895969..2898284(-) (comP) [Bacillus pumilus isolate Bacillus pumilus CIRM-BIA2784]
MKKLTYTKLSTFLVFLSFLFVIYISYIYVFDIFNGARVEKNANGQTEVVDVEYLSLAYSSGLKEGDIILKINGQSNLIQD
HMINGKLRNVQRIDIQRGNQIISLKNKTLIGRESLFVYLIPLLLYSICLFCIFFIIKINKEPQRKSAFLLILFLLSICVG
YLSAGTSGIGDRFSHYVLLLCLSSVSILYIHFIYQYFKEFDVHLTNPKLIRYLYLIPIFNLAVHSLVSVSSELRKYVPSI
SLLFFFGTVLIALYLIVRGMKKYKKTAHGSVLKFFAIMNVLSFSPFILFFVIPYVFFDKYLIDPFILTSIVLLIPFSLVY
QFMTNKLYNMDFLISRLRYYGFLAITPTIFVVVTFYILQKPEDLKYTLKLALITYALMLAVFYFKEILDFRFRLKRFSEK
HNYQDSVFKFTQLIREASSLHQVLYHLKYTILEVLVVNKAFVLEVKPDGQIEEIDESSGDSNLWKEYVDQFQDILGEVGK
IIELDKGFMMKIGERGGHSFVICCLSNLQTPKLTRDEISWLKTLAFYTSVSLENVVKIEELMEHLEDLKQREANPAWLKK
VMFAMEEKQRSDLARDLHDSVLQDLISLKRQSEMFLTNFQNDQCPTSIEQSLISWNEQMSKVIQTTRETCHELRPQLLYD
LGLVKAISKLTSQIQEEAPFHIRLNTTRFDKELDIDIDSQLNIYRIVQELLSNALKHSQASQVLVMLICIKDQVVLHYED
DGVGFDARHLDQHTMSMGLSGIRERVKALNGKLHIHTAPEKGLKVKIEMEL

Nucleotide


Download         Length: 2316 bp        

>NTDB_id=1165927 AB3Y92_RS15120 WP_144461870.1 2895969..2898284(-) (comP) [Bacillus pumilus isolate Bacillus pumilus CIRM-BIA2784]
ATGAAAAAGCTTACCTATACAAAATTGTCCACGTTTCTTGTATTTTTATCTTTTTTATTTGTGATCTATATTTCATATAT
CTATGTATTTGATATTTTTAATGGTGCACGTGTAGAAAAGAATGCTAATGGTCAAACGGAAGTTGTTGACGTTGAATATC
TTTCTTTAGCTTATTCGTCGGGGTTAAAAGAAGGAGATATTATACTAAAGATAAACGGACAATCTAATTTAATTCAAGAC
CACATGATCAATGGTAAGCTTAGAAATGTACAAAGAATTGATATACAAAGAGGCAACCAAATTATATCACTTAAAAATAA
GACATTGATTGGTCGCGAAAGTTTATTTGTCTATTTAATTCCTCTTCTTCTATATTCAATATGCTTATTCTGTATCTTTT
TTATTATTAAAATTAACAAAGAACCGCAACGGAAATCTGCATTTTTATTAATTTTATTCTTACTGTCAATTTGTGTTGGA
TATCTAAGTGCAGGTACGTCAGGAATTGGTGATAGATTTAGCCATTATGTTCTACTATTGTGTTTATCAAGTGTGTCTAT
CTTATATATCCATTTTATCTATCAATATTTCAAGGAATTTGATGTGCATTTAACGAATCCAAAGCTCATCAGGTACTTAT
ATTTGATCCCTATCTTTAACCTTGCCGTACATAGCTTGGTTTCGGTTTCATCTGAATTGAGAAAATATGTTCCTAGTATT
AGTTTACTGTTTTTTTTCGGAACAGTTTTAATAGCTCTTTATTTAATAGTCAGAGGAATGAAGAAATATAAAAAAACAGC
ACATGGTTCTGTTTTAAAGTTTTTTGCCATTATGAATGTTTTGTCGTTCAGTCCATTCATTCTATTTTTTGTTATACCCT
ATGTGTTTTTTGATAAGTATTTGATTGATCCTTTTATTTTGACATCAATCGTTTTGTTAATTCCTTTTTCCCTTGTATAC
CAATTCATGACGAACAAACTTTACAATATGGATTTCTTGATTAGTAGACTGAGGTACTATGGCTTTCTAGCCATCACACC
GACCATTTTTGTTGTTGTCACGTTTTACATTCTGCAAAAACCAGAAGATTTAAAGTACACTCTGAAGCTCGCATTAATCA
CCTATGCGCTTATGCTTGCTGTCTTTTATTTTAAAGAAATTCTAGATTTCCGCTTCCGGCTGAAACGTTTTTCAGAAAAG
CATAATTATCAGGACAGTGTGTTTAAATTTACTCAGCTCATTCGTGAGGCGTCATCACTTCACCAAGTGTTATATCATTT
GAAATACACCATTTTAGAAGTGCTGGTTGTGAATAAAGCCTTTGTGCTTGAAGTGAAGCCAGATGGACAGATTGAAGAGA
TTGATGAATCTTCAGGTGATAGCAATCTATGGAAAGAGTATGTGGATCAATTTCAGGATATTTTAGGGGAAGTCGGGAAA
ATCATTGAGCTTGATAAAGGGTTCATGATGAAAATTGGCGAGCGGGGCGGTCACTCATTTGTGATTTGCTGTTTATCCAA
TTTACAGACACCAAAATTGACGCGTGATGAGATTTCTTGGCTGAAAACATTGGCATTTTACACAAGTGTCAGTTTAGAAA
ATGTCGTCAAGATTGAAGAATTGATGGAGCATCTTGAAGATTTGAAGCAGCGTGAAGCGAACCCTGCTTGGCTGAAAAAA
GTCATGTTTGCGATGGAGGAAAAACAGCGCTCCGATTTAGCGAGGGATCTTCATGATTCCGTGCTGCAGGATTTGATATC
GCTGAAAAGACAGTCAGAGATGTTTTTAACGAATTTCCAAAACGATCAATGCCCAACGTCTATTGAACAATCGCTTATCT
CATGGAATGAACAAATGTCTAAGGTGATTCAAACGACGAGAGAAACATGTCATGAACTTCGGCCGCAGCTGCTGTACGAT
TTAGGTTTAGTGAAGGCGATATCGAAGCTGACTTCTCAAATTCAGGAGGAAGCACCATTTCATATTCGGCTGAATACGAC
ACGCTTTGATAAGGAGCTGGACATTGATATTGACTCCCAGCTCAATATATACCGAATTGTTCAGGAGCTGTTATCCAATG
CCTTGAAACATTCTCAAGCCAGCCAAGTGCTTGTAATGCTGATTTGTATTAAAGATCAGGTTGTTCTTCACTACGAGGAT
GATGGAGTTGGGTTTGACGCAAGACATCTTGATCAGCACACCATGAGCATGGGCCTTTCTGGCATCAGAGAACGAGTCAA
GGCGTTAAATGGGAAGCTTCACATTCACACAGCACCTGAAAAAGGGCTGAAGGTGAAAATTGAAATGGAATTGTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comP Bacillus subtilis subsp. subtilis str. 168

49.098

100

0.494


Multiple sequence alignment