Detailed information    

insolico Bioinformatically predicted

Overview


Name   eeP   Type   Regulator
Locus tag   AB3234_RS05485 Genome accession   NZ_OZ061257
Coordinates   1194453..1195730 (+) Length   425 a.a.
NCBI ID   WP_125579827.1    Uniprot ID   -
Organism   Levilactobacillus cerevisiae isolate Levilactobacillus cerevisiae CIRM-BIA2671     
Function   processing of ComS (predicted from homology)   
Competence regulation

Genomic Context


Location: 1189453..1200730
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AB3234_RS05455 tsf 1189817..1190701 (+) 885 WP_125579815.1 translation elongation factor Ts -
  AB3234_RS05460 pyrH 1190917..1191639 (+) 723 WP_125579817.1 UMP kinase -
  AB3234_RS05465 frr 1191636..1192199 (+) 564 WP_191983284.1 ribosome recycling factor -
  AB3234_RS05470 - 1192226..1192657 (+) 432 WP_125579821.1 hypothetical protein -
  AB3234_RS05475 - 1192758..1193549 (+) 792 WP_125579823.1 isoprenyl transferase -
  AB3234_RS05480 - 1193568..1194356 (+) 789 WP_125579825.1 phosphatidate cytidylyltransferase -
  AB3234_RS05485 eeP 1194453..1195730 (+) 1278 WP_125579827.1 RIP metalloprotease RseP Regulator
  AB3234_RS05490 - 1195766..1197478 (+) 1713 WP_125579829.1 proline--tRNA ligase -

Sequence


Protein


Download         Length: 425 a.a.        Molecular weight: 45939.30 Da        Isoelectric Point: 9.0076

>NTDB_id=1165665 AB3234_RS05485 WP_125579827.1 1194453..1195730(+) (eeP) [Levilactobacillus cerevisiae isolate Levilactobacillus cerevisiae CIRM-BIA2671]
MITTIITFIIVFGILVIVHEFGHFYFAKRGGILVREFSIGMGPKLVYHRGKDGTTYTLRLLPVGGYVRMAGAEDDEEEIK
PGTPVSLYIGADEKVQRINTSKKSTLFNGIPLEVTGTDLEDELWIEGYENGDEAEVKRYSVAHNATIIEGDGTELQIAPK
DVQFQSATLGRRLMTNFAGPMNNILLAIVTFMLMSFVQGGVAMGTNQVQVASAPISVAKKAGVQANDKITAVNGKKTTSW
TDLSNAIQPLANKKTTLTIKRGSATKHITVTPAGQKSNGKTVGMIGITQAQDKHIGAILASGFTQTWTMTKALFGALWHM
VSGHFSLNDLGGPVAIFATTSQATQYGAVGVLNFLAFLSINLAIVNLLPIPALDGGKILLNFIEAIRRKPLSENVEAAIT
LVGVGFLVLLMLLVTWNDIERYFIH

Nucleotide


Download         Length: 1278 bp        

>NTDB_id=1165665 AB3234_RS05485 WP_125579827.1 1194453..1195730(+) (eeP) [Levilactobacillus cerevisiae isolate Levilactobacillus cerevisiae CIRM-BIA2671]
GTGATTACAACGATTATTACCTTTATCATCGTTTTTGGGATTTTGGTCATCGTGCATGAATTTGGCCACTTTTACTTTGC
CAAACGCGGCGGGATCTTAGTTCGCGAATTTTCTATCGGGATGGGTCCCAAACTGGTTTACCATCGGGGCAAGGACGGCA
CAACGTACACGTTGCGGTTACTGCCCGTTGGAGGCTACGTGCGTATGGCCGGTGCCGAGGACGATGAGGAAGAAATTAAA
CCCGGAACGCCCGTCAGCCTGTACATTGGCGCTGACGAAAAGGTGCAACGGATCAACACGAGTAAAAAATCAACGCTGTT
TAATGGTATCCCACTTGAAGTGACTGGCACTGATCTAGAGGATGAACTCTGGATCGAGGGCTACGAGAACGGAGACGAGG
CAGAGGTTAAGCGTTATTCGGTCGCGCACAACGCCACGATTATTGAAGGCGACGGGACCGAACTGCAGATTGCGCCGAAA
GATGTACAATTCCAGTCCGCAACCCTGGGTCGACGGTTGATGACCAACTTTGCCGGACCGATGAACAACATCCTCTTGGC
CATTGTGACCTTTATGCTGATGTCGTTTGTGCAGGGCGGTGTCGCTATGGGGACCAATCAGGTTCAAGTGGCCAGTGCCC
CCATCTCCGTGGCCAAGAAGGCCGGCGTTCAAGCAAACGATAAGATTACGGCGGTCAACGGCAAGAAGACGACGAGTTGG
ACGGACTTGAGTAACGCCATCCAACCGCTTGCCAATAAGAAGACGACCTTAACGATCAAACGTGGCTCCGCGACCAAGCA
CATTACGGTCACACCAGCTGGCCAAAAGTCCAACGGGAAAACCGTGGGGATGATTGGGATTACTCAGGCACAAGATAAGC
ACATCGGTGCCATCTTGGCCTCTGGGTTCACCCAAACATGGACCATGACGAAAGCCCTGTTTGGTGCGCTGTGGCACATG
GTTTCCGGTCACTTTAGTTTGAACGATTTAGGTGGACCCGTCGCCATTTTTGCGACGACTTCGCAGGCTACCCAGTACGG
GGCGGTTGGGGTGCTGAACTTCTTGGCATTCTTATCGATTAACCTAGCAATTGTCAATTTATTGCCAATTCCAGCCCTCG
ATGGTGGTAAAATATTATTAAACTTTATTGAAGCCATTCGGCGCAAACCACTTTCCGAAAACGTGGAAGCGGCGATTACG
TTGGTGGGGGTAGGGTTCTTGGTTCTCCTGATGTTACTGGTCACGTGGAACGATATTGAACGTTACTTTATTCATTAA

Domains


Predicted by InterproScan.

(7-410)

(216-261)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  eeP Streptococcus thermophilus LMG 18311

49.296

100

0.494

  eeP Streptococcus thermophilus LMD-9

49.061

100

0.492


Multiple sequence alignment