Detailed information NTG1162940

Bioinformatically predicted

Overview

• Name: comP
• Type: Machinery gene
• Locus tag: ABNR97_RS11175
• Genome accession: NZ_OZ021676
• Coordinates: 2149730..2150179 (+)
• Length: 149 a.a.
• NCBI ID: WP_002214937.1
• Uniprot ID: A0AA44U8B7
• Organism: Neisseria gonorrhoeae isolate SGC-23-001
• Function: DNA binding; DNA uptake; receptor of DNA uptake sequence (DUS) (predicted from homology) DNA binding and uptake

Related MGE

Note: This gene co-localizes with putative mobile genetic elements (MGEs) in the genome predicted by VRprofile2, as detailed below.

Gene-MGE association summary

MGE type	MGE coordinates	Gene coordinates	Relative position	Distance (bp)
Genomic island	2142751..2154132	2149730..2150179	within	0

Gene organization within MGE regions

Location: 2142751..2154132

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ABNR97_RS11135	-	2142751..2143404 (+)	654	Protein_2161	TIGR01621 family pseudouridine synthase	-
ABNR97_RS11165	-	2149027..2149146 (+)	120	Protein_2162	competence protein ComE	-
ABNR97_RS11170	-	2149248..2149642 (+)	395	Protein_2163	helix-hairpin-helix domain-containing protein	-
ABNR97_RS11175	comP	2149730..2150179 (+)	450	WP_002214937.1	type IV pilin protein	Machinery gene
ABNR97_RS11180	-	2151089..2151679 (+)	591	WP_080229150.1	DNA cytosine methyltransferase	-
ABNR97_RS11185	-	2151718..2152047 (+)	330	WP_002234365.1	DNA cytosine methyltransferase	-
ABNR97_RS11190	-	2152061..2152918 (+)	858	WP_012503917.1	ATP-binding protein	-
ABNR97_RS11195	-	2153108..2153704 (+)	597	WP_012503916.1	TIGR02391 family protein	-
ABNR97_RS11200	-	2153710..2154132 (+)	423	WP_003691751.1	very short patch repair endonuclease	-

Sequence

Protein

• Length: 149 a.a.
• Molecular weight: 16834.81 Da
• Isoelectric Point: 9.7951

>NTDB_id=1162940 ABNR97_RS11175 WP_002214937.1 2149730..2150179(+) (comP) [Neisseria gonorrhoeae isolate SGC-23-001]
MTDNRGFTLVELISVVLILSVLALIVYPSYRNYVEKAKINAVRAALLENAHFMEKFYLQNGRFKQTSTKWPSLPIKEAEG
FCIRLNGIARGALDSKFMLKAVAIDKDKNPFIIKMNENLVTFICKKSASSCSDGLDYFKGNDKDCKLLK

Nucleotide

• Length: 450 bp

>NTDB_id=1162940 ABNR97_RS11175 WP_002214937.1 2149730..2150179(+) (comP) [Neisseria gonorrhoeae isolate SGC-23-001]
ATGACTGATAATCGGGGGTTTACGCTGGTTGAATTAATATCAGTGGTCTTGATATTGTCTGTACTTGCTTTAATTGTTTA
TCCGAGCTATCGCAATTATGTTGAGAAAGCAAAGATAAATGCAGTGCGGGCAGCCTTGTTAGAAAATGCACATTTTATGG
AAAAGTTTTATCTGCAGAATGGGAGATTTAAACAAACATCTACCAAATGGCCAAGTTTGCCGATTAAAGAGGCAGAAGGC
TTTTGTATCCGTTTGAATGGAATCGCGCGCGGGGCTTTAGACAGTAAATTCATGTTGAAGGCGGTAGCCATAGATAAAGA
TAAAAATCCTTTTATTATTAAGATGAATGAAAATCTAGTAACCTTTATTTGCAAGAAGTCCGCCAGTTCGTGTAGTGACG
GGCTGGATTATTTTAAAGGAAATGATAAGGACTGCAAGTTACTTAAGTAG

Domains

Predicted by InterproScan.

• Type IV minor pilin ComP, DNA uptake sequence receptor (ComP_DUS) (28-107)

• Prokaryotic N-terminal methylation motif (N_methyl) (1-27)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comP	Neisseria gonorrhoeae MS11	100	100	1
comP	Neisseria meningitidis 8013	99.329	100	0.993
comP	Neisseria subflava NJ9703	49.66	98.658	0.49