Detailed information    

insolico Bioinformatically predicted

Overview


Name   ccpA   Type   Regulator
Locus tag   U8955_RS08870 Genome accession   NZ_OY769914
Coordinates   1763047..1764057 (-) Length   336 a.a.
NCBI ID   WP_038804599.1    Uniprot ID   A0A3R9K0P0
Organism   Streptococcus oralis subsp. dentisani isolate Streptococcus dentisani 7746     
Function   regulate comCDE transcription and transformation (predicted from homology)   
Competence regulation

Genomic Context


Location: 1758047..1769057
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  U8955_RS08845 (SDENT7746_08870) - 1758269..1759483 (-) 1215 WP_038804594.1 pyridoxal phosphate-dependent aminotransferase -
  U8955_RS08850 (SDENT7746_08875) - 1759627..1759926 (-) 300 WP_038804595.1 hypothetical protein -
  U8955_RS08855 (SDENT7746_08880) - 1760093..1760545 (+) 453 WP_000079159.1 universal stress protein -
  U8955_RS08860 (SDENT7746_08885) - 1760581..1761966 (-) 1386 WP_038804597.1 Cof-type HAD-IIB family hydrolase -
  U8955_RS08865 (SDENT7746_08890) - 1762032..1762994 (+) 963 WP_038804598.1 asparaginase -
  U8955_RS08870 (SDENT7746_08895) ccpA 1763047..1764057 (-) 1011 WP_038804599.1 catabolite control protein A Regulator
  U8955_RS08875 (SDENT7746_08900) - 1764267..1764584 (+) 318 WP_000886039.1 DUF960 domain-containing protein -
  U8955_RS08880 (SDENT7746_08905) folK 1764631..1765443 (-) 813 WP_038804600.1 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine diphosphokinase -
  U8955_RS08885 (SDENT7746_08910) folE 1765486..1766040 (-) 555 WP_038804601.1 GTP cyclohydrolase I FolE -
  U8955_RS08890 (SDENT7746_08915) - 1765997..1767343 (-) 1347 WP_038804602.1 bifunctional folylpolyglutamate synthase/dihydrofolate synthase -
  U8955_RS08895 (SDENT7746_08920) folP 1767345..1768289 (-) 945 WP_038804603.1 dihydropteroate synthase -

Sequence


Protein


Download         Length: 336 a.a.        Molecular weight: 37215.31 Da        Isoelectric Point: 5.4980

>NTDB_id=1161746 U8955_RS08870 WP_038804599.1 1763047..1764057(-) (ccpA) [Streptococcus oralis subsp. dentisani isolate Streptococcus dentisani 7746]
MNTDDTVTIYDVAREAGVSMATVSRVVNGNKNVKENTRKKVLEVIDRLDYRPNAVARGLASKKTTTVGVVIPNITNGYFS
TLAKGIDDIAEMYKYNIVLANSDEDDEKEVSVVNTLFSKQVDGIIFMGYHLTEKIRSEFSRSRTPVVLAGTVDIEHQLPS
VNIDYKQATIDAVTHLLQENEKIAFVSGPLVDDINGKIRLIGYKEALKKAGIPYSEGLVFESKYSYNDGYALAERLVSSQ
ATAAVVTGDELAAGVLNGLADHGISVPEEFEIITTDDSQIARFTRPNLTTIAQPLYDLGAISMRMLTKIMHKEELEEREV
LLPHGLTERRSTRKRK

Nucleotide


Download         Length: 1011 bp        

>NTDB_id=1161746 U8955_RS08870 WP_038804599.1 1763047..1764057(-) (ccpA) [Streptococcus oralis subsp. dentisani isolate Streptococcus dentisani 7746]
ATGAACACAGATGATACAGTAACGATTTATGATGTTGCCCGTGAAGCTGGGGTTTCAATGGCAACTGTTAGCCGTGTAGT
GAATGGCAATAAGAACGTCAAAGAGAACACTCGTAAAAAAGTTCTAGAGGTGATTGATCGTCTTGACTACCGTCCAAATG
CGGTAGCGCGTGGTTTGGCCAGCAAGAAAACCACTACAGTTGGTGTTGTGATTCCAAATATCACTAATGGCTATTTTTCA
ACCCTAGCCAAGGGGATTGATGATATTGCAGAGATGTATAAGTACAATATCGTCCTAGCCAATAGTGATGAAGACGATGA
AAAAGAAGTTTCAGTAGTTAATACTCTCTTTTCAAAACAGGTTGACGGGATCATTTTTATGGGCTATCACTTGACTGAAA
AGATTCGTTCAGAATTCTCTCGTTCACGGACACCAGTTGTCCTTGCAGGAACGGTGGATATCGAACACCAGTTGCCAAGT
GTTAATATTGACTACAAACAAGCAACGATTGATGCAGTAACTCATTTGCTTCAGGAAAATGAAAAGATTGCCTTTGTCAG
TGGGCCACTTGTTGATGATATCAATGGTAAAATTCGATTGATTGGTTACAAGGAAGCTTTGAAAAAGGCAGGAATCCCTT
ATAGCGAGGGCTTGGTATTTGAGTCTAAATACAGCTATAATGATGGCTATGCCTTGGCAGAGCGCTTGGTTTCTTCACAG
GCTACAGCCGCGGTTGTGACAGGTGATGAATTGGCTGCGGGTGTGTTAAATGGCTTGGCAGATCACGGTATTTCTGTACC
AGAAGAGTTTGAAATCATCACGACAGATGATTCTCAGATTGCACGATTCACTCGTCCAAATCTGACAACGATTGCCCAAC
CTCTTTATGATCTAGGTGCTATCAGCATGCGTATGTTGACCAAAATCATGCACAAGGAAGAGTTGGAAGAACGTGAAGTT
CTCTTGCCTCACGGTTTAACAGAACGTCGTTCAACACGCAAACGTAAATAG


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A3R9K0P0

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ccpA Streptococcus pneumoniae D39

92.262

100

0.923

  ccpA Streptococcus gordonii str. Challis substr. CH1

86.826

99.405

0.863

  ccpA Lactococcus lactis subsp. lactis strain DGCC12653

57.704

98.512

0.568


Multiple sequence alignment